Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq13 134 1e-26
seq12 86.0 7e-12
>seq13
Length=2085791
Score = 134 bits (148), Expect = 1e-26
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | ||| | || | ||||| ||| |||||| ||||| ||||| || |
Sbjct 973627 ACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 973568
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|||||| || | || || ||||||||||||||||| || | |||||||||||| | |||
Sbjct 973567 CAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGG 973508
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| || |||||||||| ||| | || | |||| ||| | | | ||||| || ||
Sbjct 973507 AATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CGTTGTCGATAGTGTCAGAGGACTCA 973450
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | |||||||| ||||| || || ||||| ||||||||||||||
Sbjct 973449 ACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| ||||| ||||||||||| ||||| ||||| |||| || || || |
Sbjct 973843 ACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCC 973784
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| |||||||| ||||| |||||||| || | ||| | | ||||||
Sbjct 973783 GTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTT 973724
Query 42113 GTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|| | ||| | || | || | | | | ||||| || || || || | || |
Sbjct 973723 GT-CTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAA 973665
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || || ||||| || |||||||||||
Sbjct 973664 TAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 86.0 bits (94), Expect = 7e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 1403617 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAA 1403676
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || ||||||||||| | ||| | || |||||||| | ||| | |||| ||||
Sbjct 1403677 GATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGT-CTTGAATCTTTGACTTGACAT 1403735
Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| | | ||||| || ||||| |||| ||||| || || |||||
Sbjct 1403736 TGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212704937760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |