Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq11 113 5e-20
seq13 107 2e-18
seq12 84.2 2e-11
>seq11
Length=3629084
Score = 113 bits (124), Expect = 5e-20
Identities = 338/515 (66%), Gaps = 9/515 (2%)
Strand=Plus/Minus
Query 155010 TCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTTGA 155066
||||||||||| ||||| || || | ||| | || ||| ||||| || || ||
Sbjct 2142847 TCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCCTGG 2142788
Query 155067 TCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTG 155126
|| |||| || | || ||| |||| |||| || || | | ||| ||| ||||
Sbjct 2142787 TCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGACGTG 2142728
Query 155127 CCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAA 155186
||||||||||||| || || | |||||| ||| | || | || |
Sbjct 2142727 CCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGCGTTGAGACCGACG 2142668
Query 155187 CCTCCGCCGTATTTAGATAT--TTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGA 155244
|| || | | ||| || || | ||||| |||| | || ||||| || || | |
Sbjct 2142667 CCACCAGCATTTTTTGAGATCATAGCGCA-AGTCTTG-AGCGTGTCGTAGATGCCCTCAA 2142610
Query 155245 TGCTGTCTTCTTTCAACGTCAACAAGAAA-CACGAAGATAATTGAGGTTGAGGGCAGCCG 155303
||||||| || |||| ||| ||||| || || || | | || | ||| || |||
Sbjct 2142609 TGCTGTCCTCCTTCAT-GTCGACAAGGAAGCATGATGCGAGCTGTGCTTGTGGTGTGCCA 2142551
Query 155304 GCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTT 155363
|| ||||| | || || |||||||| || ||||||| | | ||||||||||
Sbjct 2142550 GCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTGTAAGTT 2142491
Query 155364 TCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGT 155423
|||||||| || |||||||| || |||||||||| ||||| ||||| | ||||||
Sbjct 2142490 TCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATCATGTGC 2142431
Query 155424 TGAATGCGCTCCGCAACGCGGCCGTTGATGCGCTTTAAGTACCCATTTTCCAAAGTTTTA 155483
|| || || |||| |||| |||||||| | ||| |||| ||| ||
Sbjct 2142430 TGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGAGTCTTG 2142371
Query 155484 TACGCAAAATACTTGTATTCGTAGTCTCGTTTGTA 155518
| |||| |||| ||| | | ||||||| | |||
Sbjct 2142370 AAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTA 2142336
>seq13
Length=2085791
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||| ||||| || | || || || || |||||||||||||| |
Sbjct 973399 ACCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 973340
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| | || |||||||||||||| ||| | || | ||||||||||| || ||
Sbjct 973339 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGG 973280
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || || || || ||| ||| || || | ||||| || || ||
Sbjct 973279 AATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGAC 973220
Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419
|| | || | ||||||||| ||
Sbjct 973219 CTCAAGGGTGATGGTCTTGCCAGT 973196
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || ||||||||||| || | | || || |||| || |||||||| || || |
Sbjct 973818 TCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 973759
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
||||| |||||||| || || ||||| || || || ||||| || || ||| |||
Sbjct 973758 ATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTG 973699
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | ||| || | || ||||||| || | |||||||| || | ||| || |||
Sbjct 973698 TCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACG 973639
Query 64433 AAAATTTGCAT 64443
|| ||||||||
Sbjct 973638 AAGATTTGCAT 973628
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||| || ||||| | || || || || ||||||||||| || |
Sbjct 973627 ACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 973568
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || ||||||||||| || || | || | ||||||||||| || ||
Sbjct 973567 CAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGG 973508
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| || || | || ||| || || ||
Sbjct 973507 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAAC 973448
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||| |||| ||| || || || ||||||||
Sbjct 973447 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
>seq12
Length=4887340
Score = 84.2 bits (92), Expect = 2e-11
Identities = 111/154 (72%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || || |||| || || || || || |||||||| || |
Sbjct 1403581 ACCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1403640
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| ||||||||||| ||||| | || || ||||||||||| || ||
Sbjct 1403641 AAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGG 1403700
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369
|| || || || ||||| || ||| ||| |||
Sbjct 1403701 TATGCCCTCCTTGTCTTGAATCTTTGACTTGACA 1403734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644712562160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |