Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11 113 5e-20 seq13 107 2e-18 seq12 84.2 2e-11 >seq11 Length=3629084 Score = 113 bits (124), Expect = 5e-20 Identities = 338/515 (66%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 155010 TCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTTGA 155066 ||||||||||| ||||| || || | ||| | || ||| ||||| || || || Sbjct 2142847 TCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCCTGG 2142788 Query 155067 TCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTG 155126 || |||| || | || ||| |||| |||| || || | | ||| ||| |||| Sbjct 2142787 TCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGACGTG 2142728 Query 155127 CCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAA 155186 ||||||||||||| || || | |||||| ||| | || | || | Sbjct 2142727 CCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGCGTTGAGACCGACG 2142668 Query 155187 CCTCCGCCGTATTTAGATAT--TTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGA 155244 || || | | ||| || || | ||||| |||| | || ||||| || || | | Sbjct 2142667 CCACCAGCATTTTTTGAGATCATAGCGCA-AGTCTTG-AGCGTGTCGTAGATGCCCTCAA 2142610 Query 155245 TGCTGTCTTCTTTCAACGTCAACAAGAAA-CACGAAGATAATTGAGGTTGAGGGCAGCCG 155303 ||||||| || |||| ||| ||||| || || || | | || | ||| || ||| Sbjct 2142609 TGCTGTCCTCCTTCAT-GTCGACAAGGAAGCATGATGCGAGCTGTGCTTGTGGTGTGCCA 2142551 Query 155304 GCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTT 155363 || ||||| | || || |||||||| || ||||||| | | |||||||||| Sbjct 2142550 GCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTGTAAGTT 2142491 Query 155364 TCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGT 155423 |||||||| || |||||||| || |||||||||| ||||| ||||| | |||||| Sbjct 2142490 TCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATCATGTGC 2142431 Query 155424 TGAATGCGCTCCGCAACGCGGCCGTTGATGCGCTTTAAGTACCCATTTTCCAAAGTTTTA 155483 || || || |||| |||| |||||||| | ||| |||| ||| || Sbjct 2142430 TGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGAGTCTTG 2142371 Query 155484 TACGCAAAATACTTGTATTCGTAGTCTCGTTTGTA 155518 | |||| |||| ||| | | ||||||| | ||| Sbjct 2142370 AAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTA 2142336 >seq13 Length=2085791 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| ||||| || | || || || || |||||||||||||| | Sbjct 973399 ACCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 973340 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || |||||||||||||| ||| | || | ||||||||||| || || Sbjct 973339 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGG 973280 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || ||| ||| || || | ||||| || || || Sbjct 973279 AATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGAC 973220 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | || | ||||||||| || Sbjct 973219 CTCAAGGGTGATGGTCTTGCCAGT 973196 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | | || || |||| || |||||||| || || | Sbjct 973818 TCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 973759 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| |||||||| || || ||||| || || || ||||| || || ||| ||| Sbjct 973758 ATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTG 973699 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||| || | || ||||||| || | |||||||| || | ||| || ||| Sbjct 973698 TCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACG 973639 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 973638 AAGATTTGCAT 973628 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || ||||| | || || || || ||||||||||| || | Sbjct 973627 ACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 973568 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || ||||||||||| || || | || | ||||||||||| || || Sbjct 973567 CAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGG 973508 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || ||| || || || Sbjct 973507 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAAC 973448 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| ||| || || || |||||||| Sbjct 973447 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 >seq12 Length=4887340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || || |||| || || || || || |||||||| || | Sbjct 1403581 ACCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1403640 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| ||||||||||| ||||| | || || ||||||||||| || || Sbjct 1403641 AAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGG 1403700 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369 || || || || ||||| || ||| ||| ||| Sbjct 1403701 TATGCCCTCCTTGTCTTGAATCTTTGACTTGACA 1403734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644712562160