Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 156 4e-33
seq13 105 7e-18
>seq12
Length=4887340
Score = 156 bits (172), Expect = 4e-33
Identities = 541/822 (66%), Gaps = 29/822 (4%)
Strand=Plus/Plus
Query 52029 TGGAAGGTGGAGGAGGTTGATATGTCGAGGGACTATGACGACTTTGAGTCTAAATTAAAC 52088
|||| || ||||| |||| |||| | |||| | |||||| | ||| |||
Sbjct 3658058 TGGACGGCTGAGGAAATTGACCTGTCAAAGGACCTTCACGACTGGAACAAGCGATTGAAC 3658117
Query 52089 GATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATC 52148
|| || ||||||| || || |||||| | || ||||| || || | || | |||
Sbjct 3658118 GACGATGAGCGCTTCTTCGTCTCTCACGTGCTTGCATTCTTTGCTGCATCTGACGGAATC 3658177
Query 52149 GTGAACATTAACCTCATCGAGTAC-ATGCAGCGGAACGTTCCGGAACTC-GAGGCGCAAT 52206
|| ||| |||||| |||| || || ||| || | ||| || | | ||||| | ||
Sbjct 3658178 GTCAACGAGAACCTCGTCGA--ACGATTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGAT 3658235
Query 52207 ACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCA 52266
||| || || || | | || ||| | | ||| | |||| ||| ||| ||||
Sbjct 3658236 GCTTCTACGGCTTCCAGATTATGATGGAGAACATCCACTCTGAGACATACTCTCTCCTCA 3658295
Query 52267 TTGAGCAGCTGATAAAAGATGAGC-ACGAGCGCG-AC--ACGCTGCTGAATGCGTTCGAG 52322
| || || | | | || |||| |||| ||| || || ||| | || || ||||
Sbjct 3658296 TCGA-CACAT-ACATCAGC-GAGCCACGACAGCGTACCTAC-CTGTTCAACGCCATCGAC 3658351
Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC- 52381
|| | || ||| | || || |||||| | ||||| | |||||| |||||||
Sbjct 3658352 AACATTCCATGCATCCGTAAGAAGGCTGACTGGGCTCTTCGATGGATC---AGCGACAAA 3658408
Query 52382 --CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439
| |||| | ||| || | | ||||||||| |||||||| | || || ||
Sbjct 3658409 AACTCCACCTTCGCCTGCCGACTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCG 3658468
Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499
|| ||| || || ||||||| | || | | ||| | ||||| || || || |||
Sbjct 3658469 GGATCCTTCGCTGCAATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCAGGGCTCACCTTC 3658528
Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559
||||||| | || || || || || || ||||||| ||||| || || || || |
Sbjct 3658529 TCCAACGAGCTCATCTCTCGTGATGAGGGTATGCACACTGACTTCGCTTGTCTTCTCTTC 3658588
Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTC-GGA-CACGATCCTGAGCATGTTCAAGGAGG 52617
| | | ||| ||| || | ||| | || ||| |||||| ||| ||||
Sbjct 3658589 T---CTCACCTGAA-GAACAAGCCAAGCAAGGAGCTCG-TCCAGAGCATCATCACCGAGG 3658643
Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGC--TGCTGGGCAT 52675
| || | ||||| | ||||| | |||| || || || | | || |||| |||||
Sbjct 3658644 CAGTCACAATCGAGCAAGAGTTCCTGACGGATGCTCTCCC--TTGTGCATTGCTCGGCAT 3658701
Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735
|||| | || ||||||| | |||||||| || || || || || |||||| | ||
Sbjct 3658702 GAACTCTAAGCTCATGTGCCAATACATCGAATTCGTTGCTGACCGCCTGTTGCTCGCCCT 3658761
Query 52736 CGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795
|| | | ||||||| ||||||| ||| || || || || ||| | ||||| |||||
Sbjct 3658762 TGGCAACACCAAGTACTACAACGCTGTCAACCCATTCGACTTCATGGAGAACATCTCGCT 3658821
Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| |||||||| ||||| ||||||||||| |||||||| ||
Sbjct 3658822 TGCTGGCAAGACGAACTTCTTCGAGAAGCGTGTCGGCGACTA 3658863
Score = 89.7 bits (98), Expect = 5e-13
Identities = 125/172 (73%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||| || |||||| || || || ||||
Sbjct 1403615 GACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCG 1403674
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
|||| |||||||| ||||| || ||||| || || ||||| ||| | |||| ||
Sbjct 1403675 AAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTC-TTGAATCTTTGACTTGAC 1403733
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590
|||| || | ||||| | ||||||||||||| || | || ||||| ||
Sbjct 1403734 ATTG-TCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784
>seq13
Length=2085791
Score = 105 bits (116), Expect = 7e-18
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||||| ||| | ||| | ||| | | |||||||| ||||||||||||||| |
Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| ||||| || || ||||| | |||| | ||||| ||||| || ||
Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | || | ||| || | ||||| | ||||| |
Sbjct 973506 ATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTG-TCGATAGTGTCAGAGGACTCAA 973449
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || ||||||||||| || ||||| || |||||
Sbjct 973448 CCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| |||||||||||||| || ||||| ||||||||| || || || | |
Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 973760
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTT--TGTTTTAAT 138540
||| |||||||| || || || || ||||| || ||||| ||| | || | || ||
Sbjct 973759 GATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTC-TTGAATCTTGCTCTTCACAT 973701
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | ||||| | ||||| || || | || | || || ||||| ||||| ||
Sbjct 973700 TG-TCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTG 973642
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 973641 ACGAAGATTTGCAT 973628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262313154080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |