Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12 156 4e-33 seq13 105 7e-18 >seq12 Length=4887340 Score = 156 bits (172), Expect = 4e-33 Identities = 541/822 (66%), Gaps = 29/822 (4%) Strand=Plus/Plus Query 52029 TGGAAGGTGGAGGAGGTTGATATGTCGAGGGACTATGACGACTTTGAGTCTAAATTAAAC 52088 |||| || ||||| |||| |||| | |||| | |||||| | ||| ||| Sbjct 3658058 TGGACGGCTGAGGAAATTGACCTGTCAAAGGACCTTCACGACTGGAACAAGCGATTGAAC 3658117 Query 52089 GATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATC 52148 || || ||||||| || || |||||| | || ||||| || || | || | ||| Sbjct 3658118 GACGATGAGCGCTTCTTCGTCTCTCACGTGCTTGCATTCTTTGCTGCATCTGACGGAATC 3658177 Query 52149 GTGAACATTAACCTCATCGAGTAC-ATGCAGCGGAACGTTCCGGAACTC-GAGGCGCAAT 52206 || ||| |||||| |||| || || ||| || | ||| || | | ||||| | || Sbjct 3658178 GTCAACGAGAACCTCGTCGA--ACGATTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGAT 3658235 Query 52207 ACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCA 52266 ||| || || || | | || ||| | | ||| | |||| ||| ||| |||| Sbjct 3658236 GCTTCTACGGCTTCCAGATTATGATGGAGAACATCCACTCTGAGACATACTCTCTCCTCA 3658295 Query 52267 TTGAGCAGCTGATAAAAGATGAGC-ACGAGCGCG-AC--ACGCTGCTGAATGCGTTCGAG 52322 | || || | | | || |||| |||| ||| || || ||| | || || |||| Sbjct 3658296 TCGA-CACAT-ACATCAGC-GAGCCACGACAGCGTACCTAC-CTGTTCAACGCCATCGAC 3658351 Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC- 52381 || | || ||| | || || |||||| | ||||| | |||||| ||||||| Sbjct 3658352 AACATTCCATGCATCCGTAAGAAGGCTGACTGGGCTCTTCGATGGATC---AGCGACAAA 3658408 Query 52382 --CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439 | |||| | ||| || | | ||||||||| |||||||| | || || || Sbjct 3658409 AACTCCACCTTCGCCTGCCGACTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCG 3658468 Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499 || ||| || || ||||||| | || | | ||| | ||||| || || || ||| Sbjct 3658469 GGATCCTTCGCTGCAATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCAGGGCTCACCTTC 3658528 Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559 ||||||| | || || || || || || ||||||| ||||| || || || || | Sbjct 3658529 TCCAACGAGCTCATCTCTCGTGATGAGGGTATGCACACTGACTTCGCTTGTCTTCTCTTC 3658588 Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTC-GGA-CACGATCCTGAGCATGTTCAAGGAGG 52617 | | | ||| ||| || | ||| | || ||| |||||| ||| |||| Sbjct 3658589 T---CTCACCTGAA-GAACAAGCCAAGCAAGGAGCTCG-TCCAGAGCATCATCACCGAGG 3658643 Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGC--TGCTGGGCAT 52675 | || | ||||| | ||||| | |||| || || || | | || |||| ||||| Sbjct 3658644 CAGTCACAATCGAGCAAGAGTTCCTGACGGATGCTCTCCC--TTGTGCATTGCTCGGCAT 3658701 Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 |||| | || ||||||| | |||||||| || || || || || |||||| | || Sbjct 3658702 GAACTCTAAGCTCATGTGCCAATACATCGAATTCGTTGCTGACCGCCTGTTGCTCGCCCT 3658761 Query 52736 CGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795 || | | ||||||| ||||||| ||| || || || || ||| | ||||| ||||| Sbjct 3658762 TGGCAACACCAAGTACTACAACGCTGTCAACCCATTCGACTTCATGGAGAACATCTCGCT 3658821 Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || |||||||| ||||| ||||||||||| |||||||| || Sbjct 3658822 TGCTGGCAAGACGAACTTCTTCGAGAAGCGTGTCGGCGACTA 3658863 Score = 89.7 bits (98), Expect = 5e-13 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || |||||| || || || |||| Sbjct 1403615 GACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCG 1403674 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| |||||||| ||||| || ||||| || || ||||| ||| | |||| || Sbjct 1403675 AAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTC-TTGAATCTTTGACTTGAC 1403733 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 |||| || | ||||| | ||||||||||||| || | || ||||| || Sbjct 1403734 ATTG-TCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784 >seq13 Length=2085791 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||| | ||| | ||| | | |||||||| ||||||||||||||| | Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| || || ||||| | |||| | ||||| ||||| || || Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | ||| || | ||||| | ||||| | Sbjct 973506 ATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTG-TCGATAGTGTCAGAGGACTCAA 973449 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||||||||| || ||||| || ||||| Sbjct 973448 CCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| || ||||| ||||||||| || || || | | Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 973760 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTT--TGTTTTAAT 138540 ||| |||||||| || || || || ||||| || ||||| ||| | || | || || Sbjct 973759 GATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTC-TTGAATCTTGCTCTTCACAT 973701 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | ||||| || || | || | || || ||||| ||||| || Sbjct 973700 TG-TCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTG 973642 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 973641 ACGAAGATTTGCAT 973628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262313154080