Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq13 125 7e-24
seq12 114 1e-20
>seq13
Length=2085791
Score = 125 bits (138), Expect = 7e-24
Identities = 148/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| ||| || || || ||| || ||||| || |||
Sbjct 973596 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCA 973537
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||||||||||||| || || || ||||||||||||||| || ||| ||||
Sbjct 973536 GCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 973477
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| ||||| | ||| || || | ||| | || ||||| ||||||||
Sbjct 973476 ACGTTG-TCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 973418
Query 127096 TTTTACAAAAATCTGCAT 127113
|| ||||| || |||||
Sbjct 973417 CTTGACAAAGATTTGCAT 973400
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | || ||| || ||||| ||||| || |
Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || || || ||||| ||||||||| |||| | ||||||||||| || ||
Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| || || ||| | | |||| ||||||| |||||||
Sbjct 973734 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACT 973675
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || ||||| || || || || |||||
Sbjct 973674 TCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 114 bits (126), Expect = 1e-20
Identities = 294/439 (67%), Gaps = 13/439 (3%)
Strand=Plus/Plus
Query 47145 ATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTAC 47204
||||| |||||| ||||||||| ||||||||||||| ||| || || || ||||
Sbjct 3658433 ATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGG 3658492
Query 47205 ATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGAC 47264
|||| | || | ||||| || ||||| || ||||||||| ||||| | ||
Sbjct 3658493 CTGAAGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGAT 3658552
Query 47265 GAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAA-CACTAGAGTCGATCAA---AA 47320
|| || ||||||| |||| || ||||| || | ||| || || ||| ||
Sbjct 3658553 GAGGGTATGCACACTGACTTCGCTTGTCTTCTCTTCTCTCACCTGAA--GAACAAGCCAA 3658610
Query 47321 GTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTT 47380
| | | || | | ||| | ||| | |||| || ||| | || ||| |||||
Sbjct 3658611 GCAAG--GAGCTCGTC--CAGAG-CATCATCACCGAGGCAGTCACAATCGAGCAAGAGTT 3658665
Query 47381 TTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTA 47440
| | || ||||| || | || | || |||||| | || | ||| | | ||
Sbjct 3658666 CCTGACGGATGCTCTCCCTTGTGCATTGCTCGGCATGAACTCTAAGCTCATGTGCCAATA 3658725
Query 47441 CATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATC-CCAAGATTTACCACA 47499
||||||||| || || ||||||||| | | || | | | | ||||| ||| ||
Sbjct 3658726 CATCGAATTCGTTGCTGACCGCCTGTT-GCTCGCCCTTGGCAACACCAAGTACTACAACG 3658784
Query 47500 CCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCG 47559
| | || |||||||| || ||| | ||||| ||||| | |||||||| ||||| ||||
Sbjct 3658785 CTGTCAACCCATTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACGAACTTCTTCG 3658844
Query 47560 AGAAGCGCGTCGGCGAATA 47578
||||||| |||||||| ||
Sbjct 3658845 AGAAGCGTGTCGGCGACTA 3658863
Score = 91.5 bits (100), Expect = 1e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||| | |||| || | || ||||| || || || ||||| |||
Sbjct 1403582 CCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1403641
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| ||||| ||| |||||| |||||||| || || |||
Sbjct 1403642 AGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGT 1403701
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||| | ||| | | || ||||| | |||| ||||| | | ||| ||
Sbjct 1403702 ATGCCCTCCTTGT-CTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCAC 1403760
Query 127066 TTCGACGGT 127074
|||| |||
Sbjct 1403761 CTCGAGGGT 1403769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500716787360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |