Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 125 7e-24 seq12 114 1e-20 >seq13 Length=2085791 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| || || || ||| || ||||| || ||| Sbjct 973596 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCA 973537 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||||||||||||| || || || ||||||||||||||| || ||| |||| Sbjct 973536 GCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 973477 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | ||| || || | ||| | || ||||| |||||||| Sbjct 973476 ACGTTG-TCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 973418 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| || ||||| Sbjct 973417 CTTGACAAAGATTTGCAT 973400 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || ||| || ||||| ||||| || | Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || || || ||||| ||||||||| |||| | ||||||||||| || || Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||| | | |||| ||||||| ||||||| Sbjct 973734 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACT 973675 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || ||||| || || || || ||||| Sbjct 973674 TCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq12 Length=4887340 Score = 114 bits (126), Expect = 1e-20 Identities = 294/439 (67%), Gaps = 13/439 (3%) Strand=Plus/Plus Query 47145 ATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTAC 47204 ||||| |||||| ||||||||| ||||||||||||| ||| || || || |||| Sbjct 3658433 ATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGG 3658492 Query 47205 ATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGAC 47264 |||| | || | ||||| || ||||| || ||||||||| ||||| | || Sbjct 3658493 CTGAAGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGAT 3658552 Query 47265 GAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAA-CACTAGAGTCGATCAA---AA 47320 || || ||||||| |||| || ||||| || | ||| || || ||| || Sbjct 3658553 GAGGGTATGCACACTGACTTCGCTTGTCTTCTCTTCTCTCACCTGAA--GAACAAGCCAA 3658610 Query 47321 GTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTT 47380 | | | || | | ||| | ||| | |||| || ||| | || ||| ||||| Sbjct 3658611 GCAAG--GAGCTCGTC--CAGAG-CATCATCACCGAGGCAGTCACAATCGAGCAAGAGTT 3658665 Query 47381 TTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTA 47440 | | || ||||| || | || | || |||||| | || | ||| | | || Sbjct 3658666 CCTGACGGATGCTCTCCCTTGTGCATTGCTCGGCATGAACTCTAAGCTCATGTGCCAATA 3658725 Query 47441 CATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATC-CCAAGATTTACCACA 47499 ||||||||| || || ||||||||| | | || | | | | ||||| ||| || Sbjct 3658726 CATCGAATTCGTTGCTGACCGCCTGTT-GCTCGCCCTTGGCAACACCAAGTACTACAACG 3658784 Query 47500 CCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCG 47559 | | || |||||||| || ||| | ||||| ||||| | |||||||| ||||| |||| Sbjct 3658785 CTGTCAACCCATTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACGAACTTCTTCG 3658844 Query 47560 AGAAGCGCGTCGGCGAATA 47578 ||||||| |||||||| || Sbjct 3658845 AGAAGCGTGTCGGCGACTA 3658863 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | |||| || | || ||||| || || || ||||| ||| Sbjct 1403582 CCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1403641 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| ||||| ||| |||||| |||||||| || || ||| Sbjct 1403642 AGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGT 1403701 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||| | ||| | | || ||||| | |||| ||||| | | ||| || Sbjct 1403702 ATGCCCTCCTTGT-CTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCAC 1403760 Query 127066 TTCGACGGT 127074 |||| ||| Sbjct 1403761 CTCGAGGGT 1403769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500716787360