Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq11 170 2e-37 seq12 100 3e-16 >seq11 Length=3629084 Score = 170 bits (188), Expect = 2e-37 Identities = 293/420 (70%), Gaps = 4/420 (1%) Strand=Plus/Minus Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 ||||| || || || || ||||| || || || || ||||| | |||||| || || Sbjct 2143231 TACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 2143172 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 ||| |||||| ||||||||||||||||| ||||| || || ||||| ||||| ||| Sbjct 2143171 CTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGAC 2143112 Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 116654 | || ||||| | ||| | | || | ||| ||||||| | | || ||||| | Sbjct 2143111 TCAAGGATAGCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCC 2143053 Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTG 116713 ||| |||| |||||| ||||||||| || || | || | |||| || || || Sbjct 2143052 CTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCC-ATAGACATCTGCAAGGCCGGGGC 2142994 Query 116714 CCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 116773 || || |||||| | ||||| ||| | || ||| || |||||||||||||| | Sbjct 2142993 ACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGAT 2142934 Query 116774 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 116833 |||| |||||||| || |||||||||| ||| |||| | ||||| | || ||||| Sbjct 2142933 CTGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCT 2142874 Query 116834 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 116893 || | || | ||| | | | ||| |||||||| || |||| ||| | |||| || Sbjct 2142873 TGCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATG 2142814 >seq12 Length=4887340 Score = 100 bits (110), Expect = 3e-16 Identities = 283/429 (66%), Gaps = 12/429 (3%) Strand=Plus/Minus Query 127225 CTTGCCGTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT 127284 |||| ||||||| ||||| ||||||||||||||||| ||||| ||| | || ||| || Sbjct 3658870 CTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTT 3658811 Query 127285 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTG 127342 |||||| || || |||||||| | ||| | | ||| || || || | | Sbjct 3658810 CTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTGTTGCC--AA---GGGCG 3658756 Query 127343 AGGA---GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCG 127399 || | | || || | ||| | || ||||| | |||| || ||||||||| ||| Sbjct 3658755 AGCAACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCCG 3658696 Query 127400 ATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGT 127459 | | ||| ||||| || ||| | |||| | | ||| || || || || Sbjct 3658695 AGCAATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTG 3658636 Query 127460 ACGATGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCAC 127518 | |||| || | ||| | || | || | | | || |||||| Sbjct 3658635 ATGATGCTCTGGACGAGCTCCTTGCTTGGCTTGTT-CTTCAGGTGAGAGAAGAGAAGACA 3658577 Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 ||| || || ||| | |||||| ||||| |||||||| || || |||||| || || Sbjct 3658576 AGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCC 3658517 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||| || |||||||||| ||| || || ||| || || || ||||||||||| Sbjct 3658516 TGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGAT 3658457 Query 127639 CCCCTCCAC 127647 ||||| || Sbjct 3658456 ACCCTCGAC 3658448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507092636240