Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq11 170 2e-37
seq12 100 3e-16
>seq11
Length=3629084
Score = 170 bits (188), Expect = 2e-37
Identities = 293/420 (70%), Gaps = 4/420 (1%)
Strand=Plus/Minus
Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535
||||| || || || || ||||| || || || || ||||| | |||||| || ||
Sbjct 2143231 TACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 2143172
Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595
||| |||||| ||||||||||||||||| ||||| || || ||||| ||||| |||
Sbjct 2143171 CTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGAC 2143112
Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 116654
| || ||||| | ||| | | || | ||| ||||||| | | || ||||| |
Sbjct 2143111 TCAAGGATAGCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCC 2143053
Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTG 116713
||| |||| |||||| ||||||||| || || | || | |||| || || ||
Sbjct 2143052 CTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCC-ATAGACATCTGCAAGGCCGGGGC 2142994
Query 116714 CCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 116773
|| || |||||| | ||||| ||| | || ||| || |||||||||||||| |
Sbjct 2142993 ACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGAT 2142934
Query 116774 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 116833
|||| |||||||| || |||||||||| ||| |||| | ||||| | || |||||
Sbjct 2142933 CTGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCT 2142874
Query 116834 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 116893
|| | || | ||| | | | ||| |||||||| || |||| ||| | |||| ||
Sbjct 2142873 TGCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATG 2142814
>seq12
Length=4887340
Score = 100 bits (110), Expect = 3e-16
Identities = 283/429 (66%), Gaps = 12/429 (3%)
Strand=Plus/Minus
Query 127225 CTTGCCGTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT 127284
|||| ||||||| ||||| ||||||||||||||||| ||||| ||| | || ||| ||
Sbjct 3658870 CTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTT 3658811
Query 127285 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTG 127342
|||||| || || |||||||| | ||| | | ||| || || || | |
Sbjct 3658810 CTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTGTTGCC--AA---GGGCG 3658756
Query 127343 AGGA---GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCG 127399
|| | | || || | ||| | || ||||| | |||| || ||||||||| |||
Sbjct 3658755 AGCAACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCCG 3658696
Query 127400 ATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGT 127459
| | ||| ||||| || ||| | |||| | | ||| || || || ||
Sbjct 3658695 AGCAATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTG 3658636
Query 127460 ACGATGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCAC 127518
| |||| || | ||| | || | || | | | || ||||||
Sbjct 3658635 ATGATGCTCTGGACGAGCTCCTTGCTTGGCTTGTT-CTTCAGGTGAGAGAAGAGAAGACA 3658577
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
||| || || ||| | |||||| ||||| |||||||| || || |||||| || ||
Sbjct 3658576 AGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCC 3658517
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||| || |||||||||| ||| || || ||| || || || |||||||||||
Sbjct 3658516 TGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGAT 3658457
Query 127639 CCCCTCCAC 127647
||||| ||
Sbjct 3658456 ACCCTCGAC 3658448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507092636240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |