Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq12 138 2e-27
seq11 102 1e-16
>seq12
Length=4887340
Score = 138 bits (152), Expect = 2e-27
Identities = 344/520 (66%), Gaps = 7/520 (1%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| ||||| |||||||| | | || || |||||||| ||||||||||
Sbjct 3658849 CTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTT 3658790
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
||| ||| ||| | || || || || || | ||| || || |||||
Sbjct 3658789 GACAGCGTTGTAGTACTTGGTGTTGCCAAGGGCGAGCAACAGGCGGTCAGCAACGAATTC 3658730
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA--GCCTAACGGGGAGCGCTTCC 159826
|||||| ||||| ||| | |||| || || |||| || || ||||| || |||
Sbjct 3658729 GATGTATTGGCACATGAGCTTAGAGTTCATGCCGAGCAATGCACAA--GGGAGAGCATCC 3658672
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886
| ||| ||||| | ||| || ||| || ||||| | || | ||| | || |
Sbjct 3658671 GTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGATGCTCTGGACGAGCTCCTTG 3658612
Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946
| |||||| | | ||| || || || || || ||||| ||||| |||
Sbjct 3658611 CTTGGCTTGTTCTTCAGGTGAGAG---AAGAGAAGACAAGCGAAGTCAGTGTGCATACCC 3658555
Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006
|| || |||||||||| ||||||||| | | |||| || ||||||| |||||| ||
Sbjct 3658554 TCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTTCTTC 3658495
Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066
|||||||| || || || || | || || ||||| ||||| ||||| || || ||
Sbjct 3658494 AGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAAGGCG 3658435
Query 160067 ACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126
| ||| | | || | || ||| |||| | |||| | ||||| ||||||
Sbjct 3658434 ATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCTGATCCATCGAAGAGCCCAGTCAGCC 3658375
Query 160127 TTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA 160166
||||| |||||| || ||| |||| |||||| ||||
Sbjct 3658374 TTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACA 3658335
>seq11
Length=3629084
Score = 102 bits (112), Expect = 1e-16
Identities = 337/507 (66%), Gaps = 14/507 (3%)
Strand=Plus/Minus
Query 203833 CTTCGTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAG 203890
|||| ||||| || || |||||||| || | || ||| | |||| | ||| || |||
Sbjct 2144198 CTTC-TCTTGGTCGACAGTGAACTGGATTG-GTGCACTGGCGGCCATTGTTCGAAGGTAG 2144141
Query 203891 TACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTC 203950
|||||||| ||||| || || || ||| || | |||||| || | | |||| |
Sbjct 2144140 TACATGCCAGTCTTGAGACCGAGCTTCCAACCAGTGAAGTGCATAGATGTTATCTTGCCC 2144081
Query 203951 ACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CG 204009
| | || || |||||| ||||||||| || || ||||| |||||| ||||| ||
Sbjct 2144080 ATAGTTGGCTCCTTCATGTGGATGTTCAGACTTTGACTCTGGTCAATGAAA-GCGCCTCG 2144022
Query 204010 ATCTGCGGCCATATTGATAA-TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGT 204068
||| || ||||| | | || | ||| | || ||||||||||| ||||||||| | |
Sbjct 2144021 ATCAGCAGCCATCTGCACAATTTGTCGT-TGAGAAATCTCCCAGACCGTCTTGTATAGTG 2143963
Query 204069 CTCTGGTGTGTTGAGGCACATCTTCCCACGTC-CTGATC-GAGCCGTTGTCGGCCATCAG 204126
|| | || | ||| || ||| | || |||| | || ||| |||||| || |
Sbjct 2143962 CTTTCAGGTCGTCAGG--GATATTCGGAATTCGCTGAACAGAACCGCCGTCGGCGATGAT 2143905
Query 204127 TCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGG 204185
| || || | | || | ||| | | ||| | | | || ||| | ||| |
Sbjct 2143904 GCGGTTCTTCATGTTGTCGCTCCA-AAGACCACGGTCAACGAGGTCCTTGAGCAGCCATG 2143846
Query 204186 GGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATG 204245
|||||| | || || || || | || ||| | || | | | |||| ||| |||
Sbjct 2143845 GGTTGACAACTTGGAATTCACCAGCCAACACACGCCGAGAATAAATGTTGGAAGTGTATG 2143786
Query 204246 GTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCA 204305
| ||||| ||||||| ||| | |||||| ||| ||| || ||||| || ||||
Sbjct 2143785 GCTCGAAGCACTCGTTGAAGCCCATGATCTGACTGGTCGAGGCAGTTGGCATTGGTGCCA 2143726
Query 204306 GGAGCAGGGAGTTGCGCACACCGTATT 204332
|||||| ||||| || ||||||| ||
Sbjct 2143725 TGAGCAGAGAGTTTCGTACACCGTGTT 2143699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155060847840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |