Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 141 2e-28
seq12 134 3e-26
seq13 120 7e-22
>seq6
Length=1630888
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||||||||| || ||||| || || ||||||||||| |||| ||||||||| | | ||
Sbjct 190448 TCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGT 190507
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| || |||||||||||||| ||||| ||||| |||||||| || ||| ||
Sbjct 190508 GCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCC 190567
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||| ||||||||||| |||||| |||| || || | | || || || |
Sbjct 190568 CTCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAG 190627
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGT 199628
||||| ||||| |||||||| || ||||| || | ||||
Sbjct 190628 GGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGCTGTGGT 190668
>seq12
Length=4887340
Score = 134 bits (148), Expect = 3e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| ||||| ||||| || || |||||||| |||| ||||||||| | | |||
Sbjct 1403588 CGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTG 1403647
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||||||||||||||| |||||||||||||| || || ||
Sbjct 1403648 CGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCC 1403707
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || ||||||||| ||| || |||| ||||||| | || || || |
Sbjct 1403708 TCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGG 1403767
Query 199589 GTGATCGTCTTACCCGTGA 199607
||||| |||||||||||||
Sbjct 1403768 GTGATAGTCTTACCCGTGA 1403786
>seq13
Length=2085791
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || || ||||| |||||||| || | ||||||||| | || ||| | |||||
Sbjct 973611 AGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCC 973552
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || ||| || || |||
Sbjct 973551 TCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC 973492
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||| | | || || || | ||||| |||
Sbjct 973491 TGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 973432
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| || ||||| |||||
Sbjct 973431 TTGCCAGTCAGAGTCTTGACAAAGATTTG 973403
Score = 120 bits (132), Expect = 7e-22
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497
|||||| || | ||||||||||| ||| || | || || || ||||||||||| |||||
Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 973760
Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557
||||||||||||||| || || ||| || || || |||||||| ||||||
Sbjct 973759 GATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACATT 973700
Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617
|||| ||||| | || || || || || || || ||||| || |||||||| || ||
Sbjct 973699 GTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGAC 973640
Query 199618 AAAAATTTG 199626
|| |||||
Sbjct 973639 GAAGATTTG 973631
Score = 104 bits (114), Expect = 6e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| |||||||| || |||||||| || | |||||| || | | ||
Sbjct 973392 CGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 973333
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || || ||||| | ||||||||||| || ||| |||
Sbjct 973332 CGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCT 973273
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| |||||| ||| ||| |||| ||| |||| | || || || |
Sbjct 973272 TCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGG 973213
Query 199589 GTGATCGTCTTACCCGT 199605
||||| ||||| || ||
Sbjct 973212 GTGATGGTCTTGCCAGT 973196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921388530938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |