Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 141 2e-28 seq12 134 3e-26 seq13 120 7e-22 >seq6 Length=1630888 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||||||||| || ||||| || || ||||||||||| |||| ||||||||| | | || Sbjct 190448 TCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGT 190507 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||| || |||||||||||||| ||||| ||||| |||||||| || ||| || Sbjct 190508 GCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCC 190567 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||||||||| |||||| |||| || || | | || || || | Sbjct 190568 CTCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAG 190627 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGT 199628 ||||| ||||| |||||||| || ||||| || | |||| Sbjct 190628 GGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGCTGTGGT 190668 >seq12 Length=4887340 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| ||||| || || |||||||| |||| ||||||||| | | ||| Sbjct 1403588 CGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTG 1403647 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||||||||||||||| |||||||||||||| || || || Sbjct 1403648 CGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCC 1403707 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| ||| || |||| ||||||| | || || || | Sbjct 1403708 TCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGG 1403767 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||||||||||| Sbjct 1403768 GTGATAGTCTTACCCGTGA 1403786 >seq13 Length=2085791 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || ||||| |||||||| || | ||||||||| | || ||| | ||||| Sbjct 973611 AGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCC 973552 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | ||||||||||| || ||| || || ||| Sbjct 973551 TCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC 973492 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 973491 TGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 973432 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || ||||| ||||| Sbjct 973431 TTGCCAGTCAGAGTCTTGACAAAGATTTG 973403 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| || | ||||||||||| ||| || | || || || ||||||||||| ||||| Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 973760 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 ||||||||||||||| || || ||| || || || |||||||| |||||| Sbjct 973759 GATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACATT 973700 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 |||| ||||| | || || || || || || || ||||| || |||||||| || || Sbjct 973699 GTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGAC 973640 Query 199618 AAAAATTTG 199626 || ||||| Sbjct 973639 GAAGATTTG 973631 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| || |||||||| || | |||||| || | | || Sbjct 973392 CGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 973333 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || ||||| | ||||||||||| || ||| ||| Sbjct 973332 CGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCT 973273 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| |||||| ||| ||| |||| ||| |||| | || || || | Sbjct 973272 TCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGG 973213 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| ||||| || || Sbjct 973212 GTGATGGTCTTGCCAGT 973196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921388530938