Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq13 138 1e-27 seq12 105 8e-18 seq6 95.1 1e-14 >seq13 Length=2085791 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | || ||||||| || |||||| || || ||||||||||| Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | || |||||||||| |||||| ||||| ||| | | | ||||| || || || Sbjct 973506 ATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCGATAGTGTCAGAGGACTCAAC 973448 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| ||||| ||||| || || |||||||||||||| Sbjct 973447 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 |||| ||| || | | ||| | ||||| ||||| || |||||||| || || |||||| Sbjct 973860 TATTGGCCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAG 973801 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 || || | || || |||| ||||||||||| || ||||| || | |||||||| || Sbjct 973800 TCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCT 973741 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540 | || | | ||||||||| ||||| |||| | | | | ||||| || Sbjct 973740 GGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGAC 973681 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || || ||||| || || || || || ||||||||||| Sbjct 973680 TCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || || || ||||| | || || ||||||||||| || || Sbjct 973363 CTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAA 973304 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | || ||||||||| |||||| ||||| ||| Sbjct 973303 GATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTTGACTTGA-CGT 973245 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || || || || || || | |||||||| ||||| || Sbjct 973244 TGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 973196 >seq12 Length=4887340 Score = 105 bits (116), Expect = 8e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| |||| || |||||||| |||||||| Sbjct 1403617 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAA 1403676 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||||||||| ||||| ||||| | Sbjct 1403677 GATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGAATCTTTGACTTGACATT 1403736 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | ||||| || ||||| || | ||||| || || ||||| Sbjct 1403737 GTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784 >seq6 Length=1630888 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| ||||| | ||| |||||| ||||| |||||||| || || ||||| | || || Sbjct 190460 CACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTC 190519 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| ||||| || || | || |||||||| | || | || ||| || ||| Sbjct 190520 GAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCCTG 190579 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||| | | | | || ||| || || || || | |||||||| || Sbjct 190580 AATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTT 190639 Query 46564 GCCCGTCAGCGTTTTAACAAAG 46585 |||||| || || || || ||| Sbjct 190640 GCCCGTGAGGGTCTTCACGAAG 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238301083280