Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq12 316 2e-81 seq6 104 2e-17 seq13 98.7 1e-15 >seq12 Length=4887340 Score = 316 bits (350), Expect = 2e-81 Identities = 568/822 (69%), Gaps = 11/822 (1%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | || ||| | ||| || || || |||||| Sbjct 3658848 TTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTTG 3658789 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744 | | |||||||| ||||||| | ||| ||| | ||| | ||| || ||||| ||| Sbjct 3658788 ACAGCGTTGTAGTACTTGGTGTTGCCAAGGGCGAGCAACAGGCGGTCAGCAACGAATTCG 3658729 Query 132745 ATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGG 132802 |||||||| ||||| | || | | || | || |||| | |||| || || || || | Sbjct 3658728 ATGTATTGGCACATGAGCTTAG-AGTTCATGCCGAGCA-ATGCACAAGGGAGAGCATCCG 3658671 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 | || || ||||||||| | ||| || ||||||| ||| | ||| || || || Sbjct 3658670 TCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGATGCTCTGGACGAGCTCCTTGC 3658611 Query 132863 TCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGT 132922 | ||| | | || || ||| | | ||||| ||||| |||| ||||| | Sbjct 3658610 TTGGCTTGTTCTTCAGGTGAGAGAAGAGAAGACAAGCGAAGTCAGTGTGCATACCCTCAT 3658551 Query 132923 CCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCC 132982 | | || ||||| |||||| ||| || | || ||||||||||| || || || |||| Sbjct 3658550 CACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTTCTTCAGCC 3658491 Query 132983 AAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042 |||| || || ||||| ||||| ||||||| ||||||||||| ||||| || | | Sbjct 3658490 AAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGATGA 3658431 Query 133043 GGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTT 133102 | || | |||| |||| | |||| | |||||| || || ||||| || ||||| | Sbjct 3658430 GTCGGCAGGCGAAGGTGGAGTTTTTGTCGCTGATCCATCGAAGAGCCCAGTCAGCCTTCT 3658371 Query 133103 CTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAAC 133162 || ||| || || | ||||||||||| ||| | | || | | || || || | Sbjct 3658370 TACGGATGCATGGAATGTTGTCGATGGCGTTGAAC--AGGTAGGTACGCTGTCGTGGCTC 3658313 Query 133163 GC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220 || | ||| |||||||||||| || || | || ||||| | ||||||||| || Sbjct 3658312 GCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTCAGAGTGGATGTTCTCCATCATAAT 3658253 Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGAC 133280 || |||||||| ||||| || ||||| | ||| || || | ||| || ||||| Sbjct 3658252 CTGGAAGCCGTAGAAGCATCGAGCCTCTGGGATCTGGACCTCACCACTGAATCGTTCGAC 3658193 Query 133281 CAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAA 133340 || || ||||||||||| ||||| || || || || || |||||||| || ||| Sbjct 3658192 GAGGTTCTCGTTGACGATTCCGTCAGATGCAGCAAAGAATGCAAGCACGTGAGAGACGAA 3658133 Query 133341 ATGGCGCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCAC 133397 |||||| | ||||||||| ||| | ||||||| | |||||| |||||||| | Sbjct 3658132 GAAGCGCTCATCGTCGTTCAATCGCTTGTTCCAGTCGTGAAGGTCCTTTGACAGGTCAAT 3658073 Query 133398 CTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||| | ||||| || ||||||||||| || |||||||| Sbjct 3658072 TTCCTCAGCCGTCCAGAATGACGCCTCGGCCTTCTTGTACAT 3658031 Score = 82.4 bits (90), Expect = 8e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 ||||||| || || |||||| |||| || ||| | | |||| | | | | || Sbjct 1403786 TCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGT 1403727 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 ||| || | ||||| ||||| || || | ||||| ||||| || || | ||| || | Sbjct 1403726 CAAAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAA 1403667 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || |||| ||||| || ||||||||||||||| ||||| | || || | Sbjct 1403666 AGCAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 1403607 Query 38446 ATTTGGTGCTGCG 38458 | |||| || || Sbjct 1403606 ACCTGGTCCTACG 1403594 >seq6 Length=1630888 Score = 104 bits (114), Expect = 2e-17 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| || ||| || |||| | | Sbjct 190660 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATC 190601 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || || | || |||||||| ||||| | ||||| || || | Sbjct 190600 GACAATG--TGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTC 190543 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | || || || ||||| || || | ||||| ||| |||||||||||||| | Sbjct 190542 TTATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGA 190483 Query 38431 AGGAAGCGACGCTGCATTTGGTGCT 38455 |||| |||| || ||| | ||||| Sbjct 190482 AGGAGTCGACACTTCATCTTGTGCT 190458 >seq13 Length=2085791 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| ||||||||| | || || ||| || | Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 973460 GACACTATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCA 973518 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || ||||| || || | || || || ||||||||| Sbjct 973519 GCAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAA 973578 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| | || |||||| | || || ||| || |||| || Sbjct 973579 CATTCAGAAGGAGTCCACTCTGCATCTCGTTCTTCGTCTGCGAGGTGG 973626 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| || || || | || |||||| | | Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | || | | |||| || || | ||||| ||||| ||||| | || | Sbjct 973688 GACACAATCGACAATG--TGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATC 973745 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||||| || |||| || || | ||||||| Sbjct 973746 AGCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACGTTGTCTGACTACA 973805 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||| || ||||| ||| || |||| |||||||| ||| | | || |||| Sbjct 973806 ACATTCAGAAGGAGAGC-ACCTTGCACTTGGTGCTTCGTCTTCGTGGTGGCC 973856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172712469760