Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-18 >seq4 Length=2770911 Score = 111 bits (122), Expect = 1e-18 Identities = 510/796 (64%), Gaps = 10/796 (1%) Strand=Plus/Minus Query 517859 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 517918 |||||||| | ||| || | || || | || || | || ||||| || | ||| || Sbjct 1145233 CCTTCGAAGAGAGAGTCGATCTCGATGGATGTCTGTGCAGACGAAGAGAGCGTACGCTTG 1145174 Query 517919 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG-ATTCAAATCTGT 517977 ||||| ||||| || || | || | ||| | ||| ||| | ||| | |||||||| | Sbjct 1145173 GCACGCTCACAGGCAGTTCGGAGACGTCGAAGAGCTCGTGC-GTTTGTAGTCAAATCTTT 1145115 Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTC 518037 || | || | ||||| || | ||| | | || || | || || || || || Sbjct 1145114 CTTGTGCTTGCGTTTGAACTCGTTAACGAAGTGGTTGACCAGTCTGTTGTCGAAGTCCTC 1145055 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097 ||| |||| | ||| | ||| | |||| | || | ||| | || || || | | Sbjct 1145054 ACCACCCAGGTGAGTGTCTCCAGCAGTAGACTTGACCTCGAAGATGCCCTCCTCGATGGT 1144995 Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 | ||||| ||||| ||| || ||||||| || || || || || || || Sbjct 1144994 GAGAAGAGAGACATCGAAGGTACCTCCACCCAAGTCGAAGATCAGAACGTTACGCTCGCC 1144935 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 || || || || || || || |||| |||||||||||||| || || || || | Sbjct 1144934 CTCAGTCTTCTTGTCGAGGCCGTAGGCAATGGCAGCAGCAGTTGGCTCGTTGATGATACG 1144875 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | || || || |||||||| ||||| || ||||||||||||| || || ||||| Sbjct 1144874 GAGGACGTTGAGGCCAGCAATGAGACCTGCGTCCTTAGTGGCTTGTCGCTGAGAGTCGTT 1144815 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTACCA-ATATAAGCGCTT 518335 || ||||| || ||||| | || || | | ||| | | ||| ||| | | | | Sbjct 1144814 GAAGTATGCTGGTACAGTGACGACAGCGTTGTTAACTGTGCCTCCCAGGTATGA-CTC-T 1144757 Query 518336 GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTG 518395 || || | | ||| || | | | ||| || || || | ||||| | | | |||| Sbjct 1144756 GCTGTCTCTCGCATCTTTGTGAGGACCATCGAGGAGATCTCCTCTGGTGTGAACTCCTTG 1144697 Query 518396 GATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAA 518454 | || |||| | | || | || | ||| ||| | | | || || || || Sbjct 1144696 GTCTCGCCCTTGAACTCA-ACCTGAATAACTGGCTTAGCAGCCTTGTCGATGACCTTGAA 1144638 Query 518455 TGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATC 518513 ||| ||| ||||| || | || || || | ||| || | | ||||| | | Sbjct 1144637 TGGGAAGTGCTTCATGTCGGCCTGCAC-CTCAGCGTCTGCGAACTTGCGGCCAATGAGGC 1144579 Query 518514 GTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTC 518573 | |||||||| || | ||| ||| |||| || || || |||| | ||||| ||||||| Sbjct 1144578 GCTTTGCATCGAAGACAGTGTTGATTGGGTTCATGGCGACTTGGTTCTTGGCAGCATCTC 1144519 Query 518574 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 518633 | || ||| | || || ||||| || | || | || || || || || || || || | Sbjct 1144518 CGATAAGACGCTCAGTGTCTGTGAAGGCGACGAAGGAAGGTGTCGTTCGGTTTCCCTGGT 1144459 Query 518634 CATTCGCAATAATTTC 518649 | || ||||| ||||| Sbjct 1144458 CGTTTGCAATGATTTC 1144443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821705273884