Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 455 4e-123 seq12 82.4 1e-10 >seq4 Length=2770911 Score = 455 bits (504), Expect = 4e-123 Identities = 784/1137 (69%), Gaps = 6/1137 (1%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || || || || || ||||| || ||||| || | || || Sbjct 1145500 ATGGCGGCCTGGACGGCTGCACCATAGGCAACAGCCTCGTCAGGGTTGATGGACTTGTTT 1145441 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | ||| | || || || ||||| || || || Sbjct 1145440 GGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTTGGGATACGGGTAGAA 1145381 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || ||||| | ||||| || | || || || |||||||| | ||| ||||| || Sbjct 1145380 CCTCCGACAAGGACGATCTCGTGGACAGATGACTTGTCGATCTTGGCGTCGCGAAGGGTG 1145321 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || || || ||||| | ||||| | ||| |||| ||||| || || ||| Sbjct 1145320 CGCTCAACTGGCTCCATGGTGCTGCGGAAGAGATCCTGGCACAACTCCTCGAATCGGGCA 1145261 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || || || || ||||| || || || ||| | | || || || || |||| ||| Sbjct 1145260 CGAGTGATAGAGGTGTAGAAGTCGACACCTTCGAAGAGAGAGTCGATCTCGATGGATGTC 1145201 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 ||||| | |||||| | ||| ||||| || |||||||| || ||||| | ||| ||||| Sbjct 1145200 TGTGCAGACGAAGAGAGCGTACGCTTGGCACGCTCACAGGCAGTTCGGAGACGTCGAAGA 1145141 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 || || | ||| | | ||||||||| || || ||||| ||||| | | |||||| Sbjct 1145140 GCTCGTGCGTTTGTAGTCAAATCTTTCTTGTGCTTGCGTTTGAACTCGTTAACGAAGTGG 1145081 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 | ||||| ||||| || |||||||||| ||| || || || || || | ||| Sbjct 1145080 TTGACCAGTCTGTTGTCGAAGTCCTCACCACCCAGGTGAGTGTCTCCAGCAGTAGACTTG 1145021 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || ||||| || | || ||| | | | || ||||| || ||||| ||||||| | Sbjct 1145020 ACCTCGAAGATGCCCTCCTCGATGGTGAGAAGAGAGACATCGAAGGTACCTCCACCCAAG 1144961 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 || || || || ||||| ||| | || | ||||| ||||| ||||| || || || Sbjct 1144960 TCGAAGATCAGAACGTTACGCTCGCCCTCAGTCTTCTTGTCGAGGCCGTAGGCAATGGCA 1144901 Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681 || || ||||| || || || ||||| || ||| ||||||||||| | || || Sbjct 1144900 GCAGCAGTTGGCTCGTTGATGATACGGAGGACGTTGAGGCCAGCAATGAGACCTGCGTCC 1144841 Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741 || || |||||||| || || ||||| ||||| || || || || ||||| |||| | Sbjct 1144840 TTAGTGGCTTGTCGCTGAGAGTCGTTGAAGTATGCTGGTACAGTGACGACAGCGTTGTTA 1144781 Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA 7801 ||| | || || || || || || | ||| ||| || || || |||||||| || Sbjct 1144780 ACTGTGCCTCCCAGGTATGACTCTGCTGTCTCTCGCATCTTTGTGAGGACCATCGAGGAG 1144721 Query 7802 ATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTA 7861 ||||| || | | |||| || || || || || || ||||| | ||| | || ||| Sbjct 1144720 ATCTCCTCTGGTGTGAACTCCTTGGTCTCGCCCTTGAACTCAACCTGAATAACTGGCTTA 1144661 Query 7862 TCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG 7921 ||||| | ||| ||||| | | | | ||||| ||| | || |||| | Sbjct 1144660 ---GCAGCCTTGTCGATGACCTTGAATGGGAAGTGCTTCATGTCGGCCTGCACCTCAGCG 1144604 Query 7922 TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATG 7981 || | ||||| | || || || ||||||||||| || || ||||| | ||||||||| Sbjct 1144603 TCTGCGAACTTGCGGCCAATGAGGCGCTTTGCATCGAAGACAGTGTTGATTGGGTTCATG 1144544 Query 7982 GCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACG 8041 || ||||||||| || || || ||||||||||| || | | || || || |||||| Sbjct 1144543 GCGACTTGGTTCTTGGCAGCATCTCCGATAAGACGCTC---AGTGTCTGTGAAGGCGACG 1144487 Query 8042 TACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGC 8101 | || || |||||||| || || |||||||| ||||| ||||| | ||||| | | Sbjct 1144486 AAGGAAGGTGTCGTTCGGTTTCCCTGGTCGTTTGCAATGATTTCGATTCGGTCATCGCGG 1144427 Query 8102 CAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 ||| || ||||| || ||||| || || || || |||||||| ||| | | |||| Sbjct 1144426 TAGATACCCACGCAGGAGTACGTGGTACCCAAGTCGATACCGATGGCTGGTGCCATT 1144370 Score = 87.8 bits (96), Expect = 2e-12 Identities = 198/298 (66%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 6662 TCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACA 6721 |||| || || || |||| || | || || ||| | |||||| || ||||| | Sbjct 2158573 TCGGCCTTGCCAGATCCCTTGTCAGCTGCGCTGACACGAAGAATACCGTTCGCATCGAGC 2158632 Query 6722 TCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCA 6781 ||||| | || | ||||| || ||| | ||||| | ||||||||| || | || Sbjct 2158633 TCGAAGGTGACCTCGATTTGAGGCTGACCTCGTGGTGCTGGTGGAATACCTGTGAGCTCG 2158692 Query 6782 AATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATT 6841 ||| |||| || | |||| ||| | | | | | ||||||||||| |||| || || Sbjct 2158693 AATTTACCGAGCAGGTTGTTGTCCTTTGTCATTGTTCGTTCACCTTCGTAGATTTGGATA 2158752 Query 6842 GTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATC 6901 ||| | || || ||||| || || |||||||| || ||||| | |||||| Sbjct 2158753 AGAACCACTGGCTGGTTATCGGCGGCGGTCGAGAAGATCTGGCTCTTCTTGGTTGGAATA 2158812 Query 6902 GTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAG 6959 || || | ||||| | | |||||| | |||||| | || |||| ||| |||| Sbjct 2158813 GTAGTTCCACGTGGAATGAGCTTGGTCATTACACCACCAGTGGTCTCGATTCCGAGAG 2158870 >seq12 Length=4887340 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||||||||| || | ||||| | ||||||||||||| ||||||||| Sbjct 832442 CCGATCAGACGCTTTGCATCGAAGATGGTGTTCTCTGGGTTCATGGCTGCTTGGTTCTTG 832501 Query 7997 GCCGCGTCCCCGATAAGACGTTC 8019 || || || ||||| ||||| || Sbjct 832502 GCAGCCTCTCCGATCAGACGCTC 832524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760