Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq12 149 7e-31 seq11 123 3e-23 >seq12 Length=4887340 Score = 149 bits (164), Expect = 7e-31 Identities = 327/478 (68%), Gaps = 19/478 (4%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || || || || || || || | | ||| | |||||||||||| || || ||| || Sbjct 2498940 CGGTCAAATCGTCCGGGTCGCATCAAAGCCTTGTCAAGAATATCGGGTCGATTGGTACCG 2498999 Query 11563 GCAATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 |||| || |||| ||| | ||| ||| |||||||||||| || ||||||| |||| Sbjct 2499000 GCAAGCACAACAACTTGCTCCGTCG---TGTTGAAACCGTCCATCTCCGTGAGAATCTGG 2499056 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATA--CCACCTGCCGAACGCTTCTTA 11676 || | ||| || ||||| |||||| | | | || || || || ||| Sbjct 2499057 TTCAGCGTTGACTCTCGCTCGTCGTTGCCACCACTGAAGCCGCCCTTGGATCGTGACTTT 2499116 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA--CGTGCCTGTT 11734 || | ||| || ||||| || ||||| | ||| || ||| || | | ||||| | | Sbjct 2499117 CCAATAGCATCGATCTCGTCAATGAAGATGATGCAGGGT--GTAGACTTGCGTGCGTTTG 2499174 Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794 | || || || ||||| ||| | |||||||| || |||||||||||||| | | Sbjct 2499175 CAAACAGATCCCGTACTCGCGATGGACCAACACCAACAAACATCTCAACGAACTCAGAAC 2499234 Query 11795 CAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853 |||| |||||| | ||| |||||| ||||| || || | ||| ||||| |||||| Sbjct 2499235 CAGA-CACTGAGAAGAACGGAACACCCGACTCTCCTGCTGTTGCTTTGGCGAGCAGAGTC 2499293 Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CTTC 11911 ||||| || ||||||| |||| | | |||||| || |||||||| || ||| |||| Sbjct 2499294 TTACCAGTTCCAGGTGGACCACTCAAGATGGCGCCTCGAGGGATCTTTGCGCCAAGCTTC 2499353 Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 |||| || |||| ||| ||||| |||| |||| | ||| | |||||| Sbjct 2499354 --TGGTAGATCTGCGGCTCCTTAAGGAAAGAGACAAACTCCATGATTTCTTGCTTGGC 2499409 Score = 91.5 bits (100), Expect = 2e-13 Identities = 332/508 (65%), Gaps = 15/508 (3%) Strand=Plus/Minus Query 119197 CTAACTTACCATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGA 119256 || |||| | ||||| || || | ||| |||||||| |||||||| ||| | || |||| Sbjct 3658874 CTGACTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGA 3658815 Query 119257 TGTTTTCCATAAAGTCAAAAGGATTTTTGGAGTTCCAGA--TTGGTGGTTGACCAACTTG 119314 |||| ||||| ||||| || || || | ||| || |||||| ||| |||| Sbjct 3658814 TGTTCTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTG-TTG-CCAAGGGC 3658757 Query 119315 TTTCAGAAGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACC 119374 || || || || | || | ||||| |||| | |||| | || ||||| || Sbjct 3658756 GAGCAACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCC 3658697 Query 119375 TATGAGATTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTT 119434 | | ||| ||||||||||| | ||| | | |||||| || || || | Sbjct 3658696 GAGCAATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGT 3658637 Query 119435 CACGATGGAGTGAAT-AGTTTCTGTCGATGGTTTGTTTCTCAAG--AGTTTAAACAACTC 119491 | |||| || | || | || | ||| ||||| ||| | || | | || | Sbjct 3658636 GATGATGCTCTGGACGAGCTCCTTGCT-TGGCTTGTTCTTCAGGTGAGAGAAGAGAAGAC 3658578 Query 119492 TACGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAG 119551 | || || || || | || ||||| |||||||||||||| || |||| || Sbjct 3658577 AA--GCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520 Query 119552 TCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAA 119611 || |||||||| || | ||||| ||||||||||| ||| || ||| || ||||| Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460 Query 119612 GATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC-- 119668 ||| ||||| || |||||| |||| || || ||| ||||| ||| ||||| Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTCG-GCAGGCGAAGGTGGAGTTTTTGTCGC 3658401 Query 119669 -GAACCACTTGAGAGCCCAGTTGGCCTT 119695 || ||| |||||||||| ||||| Sbjct 3658400 TGATCCATCGAAGAGCCCAGTCAGCCTT 3658373 >seq11 Length=3629084 Score = 123 bits (136), Expect = 3e-23 Identities = 309/467 (66%), Gaps = 2/467 (0%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 ||||| |||||||| ||||| ||||| |||| | ||| || || || || | Sbjct 2143282 GGGAGTGCAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATG 2143223 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || ||||||||||| || || || | ||||||||| || ||| | Sbjct 2143222 ATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGG 2143163 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 || || |||||||| ||||||||||||||||| ||||| || || || |||| || || Sbjct 2143162 TTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGATA 2143103 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 || | ||| | | || | |||| | ||||| | | | |||| || |||| |||| Sbjct 2143102 GCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCCCTCATACTG 2143044 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 ||| | | |||||| |||| ||| || ||||| | ||| || || | || Sbjct 2143043 CTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGG 2142984 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 ||| | ||| | ||| | || ||| || | ||||||||| || || || ||||| Sbjct 2142983 ACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCA 2142924 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || |||| || || || ||| ||||||| | || || || ||| || || Sbjct 2142923 GAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTC 2142864 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746 | ||| | | | ||| | ||||||||| || | |||| |||| Sbjct 2142863 GAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGA 2142817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975896929200