Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 7e-31
seq11 123 3e-23
>seq12
Length=4887340
Score = 149 bits (164), Expect = 7e-31
Identities = 327/478 (68%), Gaps = 19/478 (4%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| || || || || || || | | ||| | |||||||||||| || || ||| ||
Sbjct 2498940 CGGTCAAATCGTCCGGGTCGCATCAAAGCCTTGTCAAGAATATCGGGTCGATTGGTACCG 2498999
Query 11563 GCAATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619
|||| || |||| ||| | ||| ||| |||||||||||| || ||||||| ||||
Sbjct 2499000 GCAAGCACAACAACTTGCTCCGTCG---TGTTGAAACCGTCCATCTCCGTGAGAATCTGG 2499056
Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATA--CCACCTGCCGAACGCTTCTTA 11676
|| | ||| || ||||| |||||| | | | || || || || |||
Sbjct 2499057 TTCAGCGTTGACTCTCGCTCGTCGTTGCCACCACTGAAGCCGCCCTTGGATCGTGACTTT 2499116
Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA--CGTGCCTGTT 11734
|| | ||| || ||||| || ||||| | ||| || ||| || | | ||||| | |
Sbjct 2499117 CCAATAGCATCGATCTCGTCAATGAAGATGATGCAGGGT--GTAGACTTGCGTGCGTTTG 2499174
Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794
| || || || ||||| ||| | |||||||| || |||||||||||||| | |
Sbjct 2499175 CAAACAGATCCCGTACTCGCGATGGACCAACACCAACAAACATCTCAACGAACTCAGAAC 2499234
Query 11795 CAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853
|||| |||||| | ||| |||||| ||||| || || | ||| ||||| ||||||
Sbjct 2499235 CAGA-CACTGAGAAGAACGGAACACCCGACTCTCCTGCTGTTGCTTTGGCGAGCAGAGTC 2499293
Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CTTC 11911
||||| || ||||||| |||| | | |||||| || |||||||| || ||| ||||
Sbjct 2499294 TTACCAGTTCCAGGTGGACCACTCAAGATGGCGCCTCGAGGGATCTTTGCGCCAAGCTTC 2499353
Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
|||| || |||| ||| ||||| |||| |||| | ||| | ||||||
Sbjct 2499354 --TGGTAGATCTGCGGCTCCTTAAGGAAAGAGACAAACTCCATGATTTCTTGCTTGGC 2499409
Score = 91.5 bits (100), Expect = 2e-13
Identities = 332/508 (65%), Gaps = 15/508 (3%)
Strand=Plus/Minus
Query 119197 CTAACTTACCATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGA 119256
|| |||| | ||||| || || | ||| |||||||| |||||||| ||| | || ||||
Sbjct 3658874 CTGACTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGA 3658815
Query 119257 TGTTTTCCATAAAGTCAAAAGGATTTTTGGAGTTCCAGA--TTGGTGGTTGACCAACTTG 119314
|||| ||||| ||||| || || || | ||| || |||||| ||| ||||
Sbjct 3658814 TGTTCTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTG-TTG-CCAAGGGC 3658757
Query 119315 TTTCAGAAGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACC 119374
|| || || || | || | ||||| |||| | |||| | || ||||| ||
Sbjct 3658756 GAGCAACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCC 3658697
Query 119375 TATGAGATTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTT 119434
| | ||| ||||||||||| | ||| | | |||||| || || || |
Sbjct 3658696 GAGCAATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGT 3658637
Query 119435 CACGATGGAGTGAAT-AGTTTCTGTCGATGGTTTGTTTCTCAAG--AGTTTAAACAACTC 119491
| |||| || | || | || | ||| ||||| ||| | || | | || |
Sbjct 3658636 GATGATGCTCTGGACGAGCTCCTTGCT-TGGCTTGTTCTTCAGGTGAGAGAAGAGAAGAC 3658578
Query 119492 TACGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAG 119551
| || || || || | || ||||| |||||||||||||| || |||| ||
Sbjct 3658577 AA--GCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520
Query 119552 TCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAA 119611
|| |||||||| || | ||||| ||||||||||| ||| || ||| || |||||
Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460
Query 119612 GATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC-- 119668
||| ||||| || |||||| |||| || || ||| ||||| ||| |||||
Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTCG-GCAGGCGAAGGTGGAGTTTTTGTCGC 3658401
Query 119669 -GAACCACTTGAGAGCCCAGTTGGCCTT 119695
|| ||| |||||||||| |||||
Sbjct 3658400 TGATCCATCGAAGAGCCCAGTCAGCCTT 3658373
>seq11
Length=3629084
Score = 123 bits (136), Expect = 3e-23
Identities = 309/467 (66%), Gaps = 2/467 (0%)
Strand=Plus/Minus
Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340
||||| |||||||| ||||| ||||| |||| | ||| || || || || |
Sbjct 2143282 GGGAGTGCAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATG 2143223
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
|| || || ||||||||||| || || || | ||||||||| || ||| |
Sbjct 2143222 ATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGG 2143163
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
|| || |||||||| ||||||||||||||||| ||||| || || || |||| || ||
Sbjct 2143162 TTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGATA 2143103
Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
|| | ||| | | || | |||| | ||||| | | | |||| || |||| ||||
Sbjct 2143102 GCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCCCTCATACTG 2143044
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579
||| | | |||||| |||| ||| || ||||| | ||| || || | ||
Sbjct 2143043 CTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGG 2142984
Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639
||| | ||| | ||| | || ||| || | ||||||||| || || || |||||
Sbjct 2142983 ACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCA 2142924
Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699
| || |||| || || || ||| ||||||| | || || || ||| || ||
Sbjct 2142923 GAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTC 2142864
Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746
| ||| | | | ||| | ||||||||| || | |||| ||||
Sbjct 2142863 GAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGA 2142817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975896929200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |