Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq13 163 6e-35
seq12 145 2e-29
seq6 125 2e-23
>seq13
Length=2085791
Score = 163 bits (180), Expect = 6e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || || ||||||||||| || ||||| ||||| |||| ||||| | ||||| ||
Sbjct 973609 AACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTC 973550
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| |||||||| | ||| || |||||||| |||||||| || ||||| ||
Sbjct 973549 AAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTG 973490
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||||||||| || || ||||| || || || |||||||| | |||||
Sbjct 973489 AATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTT 973430
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||| || || || | ||||||
Sbjct 973429 GCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 127 bits (140), Expect = 5e-24
Identities = 139/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || ||||| |||||||| | || || | ||||| ||
Sbjct 973380 ACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCCTCA 973321
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| ||||| ||||| | || || ||||| || ||||||||||| ||||| ||
Sbjct 973320 AGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 973261
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| ||| ||||||||| || ||||| || || || || |||||||| | |||||
Sbjct 973260 ATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTG 973201
Query 195112 CCTGT 195116
|| ||
Sbjct 973200 CCAGT 973196
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008
||| || ||||| ||||| || | | || | || || ||||||||||| || |||||
Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 973760
Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068
||| || || || || ||||| ||||| || || ||||||||||| || ||| || ||
Sbjct 973759 GATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACATT 973700
Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128
|| || |||||||| || ||||| | |||| ||||| || || | ||| || ||
Sbjct 973699 GTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGAC 973640
Query 195129 GAACACTTGCAT 195140
||| | ||||||
Sbjct 973639 GAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 145 bits (160), Expect = 2e-29
Identities = 143/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| |||||||| || || || ||||| |||| |||||| | || || ||
Sbjct 1403600 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCA 1403659
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || |||||||| || ||||| || |||||||||
Sbjct 1403660 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1403719
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| ||| |||||| || || || ||||| ||| ||||| || ||||| | |||||
Sbjct 1403720 ATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTA 1403779
Query 195112 CCTGT 195116
|| ||
Sbjct 1403780 CCCGT 1403784
>seq6
Length=1630888
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | ||||| ||||| || ||||| || || || ||||| || | || || |
Sbjct 190452 AGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGG 190511
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| ||||||||||| || || |||||||| ||||| |||||||| |||||||| |||
Sbjct 190512 CCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCT 190571
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || ||||| || ||| || || || || || || || || || || |||||
Sbjct 190572 TTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTG 190631
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| ||||| || || | || || |||||
Sbjct 190632 ATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481400986738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |