Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 seq12 86.0 5e-12 >seq13 Length=2085791 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || ||||| ||||| || || ||| | || | || || | ||| Sbjct 973603 ATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTG 973544 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 |||||| || || |||| |||||| || || | |||| |||||||||||| |||||| Sbjct 973543 CTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTT 973484 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | || || || | ||| ||||| | || || || || || || Sbjct 973483 CGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 973424 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 || ||| || ||||| || ||||| Sbjct 973423 CAGAGTCTTGACAAAGATTTGCAT 973400 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | |||||||| || ||||| ||||| ||||| | | || Sbjct 973845 AGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGG 973786 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || || || || || ||||| ||||| | |||| |||||| Sbjct 973785 CCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCC 973726 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | || || | ||| || || | ||| Sbjct 973725 TTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTA 973666 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | ||| || || || || ||||| Sbjct 973665 ATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq12 Length=4887340 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || || ||| ||| || || || ||||| || || ||| | ||| |||| || Sbjct 1403600 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCA 1403659 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||| ||||| || || | || | |||||||||||| | Sbjct 1403660 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1403719 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || ||| | | | ||||| | ||||||||| | || || || || Sbjct 1403720 ATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTA 1403779 Query 48738 CCCGT 48742 ||||| Sbjct 1403780 CCCGT 1403784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937535002522