Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq13 89.7 4e-13
seq12 86.0 5e-12
>seq13
Length=2085791
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||| || ||||| ||||| || || ||| | || | || || | |||
Sbjct 973603 ATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTG 973544
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
|||||| || || |||| |||||| || || | |||| |||||||||||| ||||||
Sbjct 973543 CTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTT 973484
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| || | | || || || | ||| ||||| | || || || || || ||
Sbjct 973483 CGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 973424
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
|| ||| || ||||| || |||||
Sbjct 973423 CAGAGTCTTGACAAAGATTTGCAT 973400
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || | |||||||| || ||||| ||||| ||||| | | ||
Sbjct 973845 AGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGG 973786
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || || || ||||| ||||| | |||| ||||||
Sbjct 973785 CCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCC 973726
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | || || | ||| || || | |||
Sbjct 973725 TTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTA 973666
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | ||| || || || || |||||
Sbjct 973665 ATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 86.0 bits (94), Expect = 5e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || || ||| ||| || || || ||||| || || ||| | ||| |||| ||
Sbjct 1403600 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCA 1403659
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || ||||| ||||| || || | || | |||||||||||| |
Sbjct 1403660 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1403719
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|||||| || ||| | | | ||||| | ||||||||| | || || || ||
Sbjct 1403720 ATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTA 1403779
Query 48738 CCCGT 48742
|||||
Sbjct 1403780 CCCGT 1403784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937535002522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |