Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq11 239 8e-58 seq12 163 5e-35 >seq11 Length=3629084 Score = 239 bits (264), Expect = 8e-58 Identities = 825/1264 (65%), Gaps = 37/1264 (3%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 ||||| || || || || |||||||| |||||| ||||||| || | ||||| || Sbjct 2143552 GTCAGTGCGGCATGATACATGGTCTCGAAGATCTGAATGTTGAG-CTGACGAGCCTCTGG 2143494 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCC-CTGTACTCCGATAC 221534 ||| || ||||| ||||| | || |||| ||||| || ||| ||||| | | Sbjct 2143493 AGAGTCAAATGGCATGCGCAGAGCAAGGAATGCGTCAGCCAGACCACTG-ACTCCAAGGC 2143435 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594 |||| |||||||| | | |||| || || || ||||| || || ||||| || Sbjct 2143434 CGATAGGCCTGTGGCGCATGTTCGACTTACGAGCCTCCGGCACAGGGTAGTGGTTGATGT 2143375 Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654 |||| |||||||||||| || | ||| | || |||||| |||||||||| | Sbjct 2143374 CGATGGTTTTGTTGAGGTTCTTGGTAACGACCTGGACGACCTCGTGCAGCTTCTGGAAGT 2143315 Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714 ||| ||| ||| ||| ||| || || ||| || |||| | Sbjct 2143314 CGAAA-------CGCT--CGTTGTGAAGG---TCAACGTAAGTTGGGAGTGCAATAGATG 2143267 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 | ||||| || || || ||||| || | ||||| |||||||| || || | || Sbjct 2143266 CAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCGGTGCACAAGT 2143207 Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGT 221834 || || ||| || || |||| || || || |||||| || ||| ||||||| Sbjct 2143206 TGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAGCATCCTTGT 2143147 Query 221835 AGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG-TTCT 221893 ||||||| | || ||||||||| |||| | | || || || |||||| |||| Sbjct 2143146 AGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGATAGCGTACCAGAGCTTCT 2143087 Query 221894 CTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 ||||| ||| || ||| ||| | ||||||| | |||||| |||||| | Sbjct 2143086 -GGGCGCGCACAGT-CTCACGACCACGACCCTCGCCC---TCATACTGCTCGTAGAGCTT 2143032 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 ||||||| || || || | || | ||||| || ||| |||||||| ||| | Sbjct 2143031 CTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGT 2142972 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||| | |||| | ||| | || ||||||||| || || ||||| || || | || Sbjct 2142971 CCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAA 2142912 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 |||||| | | || ||| ||| ||||| || || | || || | || |||| Sbjct 2142911 GAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGGCAAA 2142852 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | || |||||||| ||||||| |||| ||| | || || ||||| |||||||| || Sbjct 2142851 CACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCC 2142792 Query 222193 CTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 ||| || || ||| | | | |||||| | || || | || || || |||||| Sbjct 2142791 CTGGTCAACGTATC--GGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTG 2142734 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG 222310 || ||||||||||| | ||||| | ||| | || | | | | || | Sbjct 2142733 GACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGCGTTGAGA 2142674 Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 |||| ||||| || | ||| |||||||| ||||| ||||||| ||||| ||||||| Sbjct 2142673 CCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGCCC 2142614 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT-TGGTGGA 222429 || || ||||||||| | || | || || || || | | ||| | || ||||| Sbjct 2142613 TCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCTTGTGGTGTG 2142554 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTA 222489 || ||| ||| ||||| || ||||||||| ||||| | ||||| || | ||| Sbjct 2142553 CCA-GCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTGTA 2142495 Query 222490 CGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATGTACA 222548 || || | | | | |||| || || || || | | | | || | ||| || Sbjct 2142494 AGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACA-CGCATAATCA 2142436 Query 222549 TGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTGGAGAGC---AGGTACGATTTTTCCA 222605 ||| ||| || | | | | | |||| |||| | || ||||| ||| |||| Sbjct 2142435 TGTGCTGTGGTCGTT---CTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCA 2142379 Query 222606 GAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCA 222665 |||||||||| |||||||| | | || ||||||| | ||| || | ||| | || || Sbjct 2142378 GAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTACACGATGGCAGAGTTCA 2142319 Query 222666 GCTC 222669 |||| Sbjct 2142318 GCTC 2142315 >seq12 Length=4887340 Score = 163 bits (180), Expect = 5e-35 Identities = 563/877 (64%), Gaps = 25/877 (3%) Strand=Plus/Plus Query 25463 TAACACA-CAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCC 25521 ||||||| || |||| | || |||||||||||||||| | ||| |||||| || Sbjct 3658009 TAACACAGCACAGATCT--GGCAGATGTACAAGAAGGCCGAGGCGTCATTCTGGACGGCT 3658066 Query 25522 GAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAG 25581 || || ||||| ||| | |||||| | ||| |||| || | || || ||||| || Sbjct 3658067 GAGGAAATTGACCTGTCAAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGATGAG 3658126 Query 25582 CATTTTCTCAAGT---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAG 25638 | || || | ||||| | ||||||||||| || ||||| || || || |||||| Sbjct 3658127 CGCTTCTTCGTCTCTCACGTGCTTGCATTCTTTGCTGCATCTGACGGAATCGTCAACGAG 3658186 Query 25639 AATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGT 25698 || || ||| |||||| | || || ||| | ||||| || |||||||| Sbjct 3658187 AACCTCGTCGAACGATTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGATGCTTCTACGGC 3658246 Query 25699 TTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACG 25755 |||||||| || || || | ||||||||| || | || || || || Sbjct 3658247 TTCCAGATTATGATGGAGAACATCCACTCTGAGACATA---CTCTCTCCTCATCGACACA 3658303 Query 25756 TACATTACAGACGTCGCCGAGAGAGATC--GGCTGTTTGGTGCCATCGAGCACATACCCA 25813 ||||| ||| | ||| || | | ||||| |||||||| |||| || Sbjct 3658304 TACAT--CAGCGAGCCACGACAGCGTACCTACCTGTTCAACGCCATCGACAACATTCCAT 3658361 Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873 ||||| | |||||| ||||| | ||||||| | | | | | | || || | Sbjct 3658362 GCATCCGTAAGAAGGCTGACTGGGCTCTTCGATGGATCAGCGACAAAAACTCCACCTTCG 3658421 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933 | || || | ||||| || || || ||||| ||||| ||| || || || || | Sbjct 3658422 CCTGCCGACTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTG 3658481 Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 | ||||| ||||| ||| || || |||||| ||||| ||| ||||||||||||| Sbjct 3658482 CAATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCA 3658541 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGC 26053 || | || |||||| | |||| || || || || || |||| | | ||| || Sbjct 3658542 TCTCTCGTGATGAGGGTATGCACACTGACTTCGCTTGTCTTCTCTTCTC---TCACCTGA 3658598 Query 26054 TCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGA 26113 |||| || | ||| |||| | || ||||||| ||||| || |||||| Sbjct 3658599 AGAACAAGCCAAGCAAGGAGCTCGTCCAGAGCATCATCACCGAGGCAGTCACAATCGAGC 3658658 Query 26114 AGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGA 26173 | ||||| | | ||||||||| | |||||| Sbjct 3658659 AAGAGTTCCTGACGGATGCTCTCCCTTGTGCATTGCTCGGCATGAACTCTAAGCTCATGT 3658718 Query 26174 GCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCT 26233 |||||||||| || | || || |||| ||| || | || || | ||| || Sbjct 3658719 GCCAATACATCGAATTCGTTGCTGACCGCCTGTTGCTCGCCCTTGGCAACACCAAGTACT 3658778 Query 26234 ACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 ||| |||| ||||| |||||||| ||||| ||||| ||| | | || ||||| || Sbjct 3658779 ACA--ACGCTGTCAACCCATTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACGAA 3658836 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTA--TCAAGTCA 26326 |||||| || ||| | ||||||||||| ||||||| Sbjct 3658837 CTTCTTCGAGAAGCGTGTCGGCGACTACGCCAAGTCA 3658873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844637452160