Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-13 seq6 89.7 3e-12 >seq13 Length=2085791 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||||||||| || || ||||| || ||||| || ||||| || |||||| Sbjct 973782 TCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTG 973723 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||| || ||| || || || || | || | | ||| | ||||| Sbjct 973722 TCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGA-CTTCTAATGTAAT 973664 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || ||||||||||| ||||| ||||| Sbjct 973663 AGTCTTGCCAGTGAGAGTCTTGACGAAGATTTG 973631 >seq6 Length=1630888 Score = 89.7 bits (98), Expect = 3e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| | ||| |||||||||||||| || || | || || || | || || Sbjct 190449 CGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTG 190508 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||| || || |||||||| ||||| ||||||||||| || || || ||||| || Sbjct 190509 CGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCC 190568 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || || || |||||||| || ||| || |||||||| | | | || ||| Sbjct 190569 TCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGG 190628 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763 || || || || || ||||| ||||| ||||| Sbjct 190629 GTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178599472072