Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq11 100 8e-16
seq12 87.8 5e-12
>seq11
Length=3629084
Score = 100 bits (110), Expect = 8e-16
Identities = 388/598 (65%), Gaps = 34/598 (6%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATG-CGTCATATAGCCG 251465
||||| ||||| | | || | || |||| | |||| || | || | ||| || ||
Sbjct 792581 ATAAGTCCACAGATCTCGCAGATGTGTACGCGGAAAGCGTC-GCTGACATCAAGAAGTCG 792523
Query 251466 ACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
||||| |||| ||||||||||| | |||||| |||||||| ||||| || |||||
Sbjct 792522 CTCCTTGAGGAAGGCTGATGCACCGTGAGCAATCATGCAATCACGTTCCATCTCTCCGAA 792463
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585
||| || |||||||| || || | ||| || ||||||||||||| || | || |||
Sbjct 792462 ACGCAGTCCACCATCTCGTGCACGACCTTCCACAGGCTGACGAGTCAGGATCTGCAGAGG 792403
Query 251586 ACCGATGGAGCGGCTATGTTG--CTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643
|| ||||| | || | ||| || | ||||| || ||||| || ||| |
Sbjct 792402 GCC--ACGAGCGCGTGCGTGGATCTTGTCGTCCACCATGTGGCGCAGACGTTGATAGTAG 792345
Query 251644 GCGGGACCGATGAAGA----TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACAT 251699
| ||||| | ||| | |||| || | || |||||| | |||| |||||
Sbjct 792344 GTCGGACCAAGGAACACCTGAGCTCTGAG----CTTCTTTCCAGTATGTCCGTTGTACAT 792289
Query 251700 AACTTCGTTTCCATTAGATTCATAACCAAGTTTCTGT-----AGCTCTGAAGCAATATCA 251754
|||||| ||| || ||| ||||| || | | | ||| |||
Sbjct 792288 GACTTCGAAGCCACGTTGTT-----GGAAGCCTCTGTCGATGAGATGTCTCGAAATGTCA 792234
Query 251755 CCAATCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCAT--TTGAATCAACA 251812
| ||| || | || ||| ||||||| | ||||| | ||| | ||
Sbjct 792233 GTGACGGTGAGGTTAGTGAATGGTGTGGCGTCTCCCTCGAGACCGTTCAATGATGCGAC- 792175
Query 251813 CTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGG 251872
||||| | || | ||| ||| || || || |||||||| ||||| || || |
Sbjct 792174 CTTTGAC-AACAAACACTCAATCAAATGAGCAATTGTCATACGCGACGGAATGGCGTGAG 792116
Query 251873 GATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--C 251930
| ||||||||||| || ||| | | ||||| |||| ||| ||||| || ||||| |
Sbjct 792115 GGTTGATGATGATATCTGGTGTGATACCATCTGCAGAGAACGGCATGTC---TTCCTGGC 792059
Query 251931 AATA-ATGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||| || | ||||| || || || || || || ||||| |||||| ||||||||
Sbjct 792058 GATAGGTGATACCAATCGTACCTTTCTGACCATGTCGAGAGGCGAACTTGTCACCAAT 792001
Score = 84.2 bits (92), Expect = 6e-11
Identities = 111/154 (72%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||||||| || || || || || ||| ||| | | ||| || || | |||||
Sbjct 2143275 CAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCGG 2143216
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
||||| ||| || || ||| ||||| | ||||||||||| || | ||||||||
Sbjct 2143215 TGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAG 2143156
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTC 155740
|||||||||| || ||||||||||| || |||||
Sbjct 2143155 CATCCTTGTAGAGCATGTATGGGGTGCCAGTCTC 2143122
>seq12
Length=4887340
Score = 87.8 bits (96), Expect = 5e-12
Identities = 142/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGG---AGAATTTTGTCTCGCA 289083
|| |||| |||||| || ||||||||||| || | || || ||| || || ||
Sbjct 2499114 TTTCCAATAGCATCGATCTCGTCAATGAAGATGATGCAGGGTGTAGACTTGCGT---GCG 2499170
Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143
||||||| | || | ||| || |||| |||| ||||||| |||| || || || |||
Sbjct 2499171 TTTGCAAACAGATCCCGTACTCGCGATGGACCAACACCAACAAACATCTCAACGAACTCA 2499230
Query 289144 GAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203
||| | || ||| | ||| | ||| | || |||||| ||| | || || ||
Sbjct 2499231 GAACCAGACACTGAGAAGAACGGAACACCCGACTCTCCTGCTGTTGCTTTGGCGAGCAGA 2499290
Query 289204 GTCTTACCTGTTCCAGGTGGTCC 289226
|||||||| ||||||||||| ||
Sbjct 2499291 GTCTTACCAGTTCCAGGTGGACC 2499313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817335992718
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |