Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 1e-27
seq12 125 9e-23
seq11 111 2e-18
>seq7
Length=1646986
Score = 141 bits (156), Expect = 1e-27
Identities = 111/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| |||||| | |||||||||||||||||| | ||||||||| | |||||||| | ||
Sbjct 1152173 CTGTTTGAGATTATCCTCGCCGCCAACTACATGGACATCAAGGCCTTGCTCGATGTCGGT 1152114
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | || || |||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 1152113 TGCAAGACAGTCGCGAACATGATCAAGGGCAAGTCACCAGAGGAGATCCGCAAGACGTTC 1152054
Query 1592288 AACATCAAGTACG 1592300
||||| || |||
Sbjct 1152053 AACATTCAGAACG 1152041
>seq12
Length=4887340
Score = 125 bits (138), Expect = 9e-23
Identities = 205/290 (71%), Gaps = 13/290 (4%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||| | |||||| |||| ||| || ||||||||||| |||||
Sbjct 3658558 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTT 3658499
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| ||||||||||| || ||| |||||||| ||||| |||||||||||||| ||
Sbjct 3658498 CTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAA 3658439
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355
| ||||||| || ||| |||||| ||| | |||| ||||||| | ||
Sbjct 3658438 GGCGATGAGTCGGCAGGCGAAGGTG--GAG----TTTTTGTCGCTGATCCATCGAAGAGC 3658385
Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGT-CC 869413
|||||| ||||| || | | | || | ||||||||||| || |||| ||| |
Sbjct 3658384 CCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACAGGTAGGTACG 3658325
Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
| ||| || || ||| || |||||||| ||||| || || |||||
Sbjct 3658324 CTGTCG--TGGCTCGCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTC 3658277
Score = 113 bits (124), Expect = 6e-19
Identities = 171/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 868693 CTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAA 868752
||||||||| ||||| || ||| |||||| ||||| |||||||| | ||||||||
Sbjct 3658870 CTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTT 3658811
Query 868753 CTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG-A 868811
|||||| | ||| |||||| | ||||||| ||| | || || | || | |
Sbjct 3658810 CTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTGTTGCCAAGGG-CGAGCA 3658752
Query 868812 GCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGA 868871
||||||||| || || || |||||||| ||||||||||| | ||||||||||| |
Sbjct 3658751 ACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCCGAGCA 3658692
Query 868872 GCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931
|| || || | || ||| ||||||| |||||| ||| |||||| |||||
Sbjct 3658691 ATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGA 3658632
Query 868932 T 868932
|
Sbjct 3658631 T 3658631
>seq11
Length=3629084
Score = 111 bits (122), Expect = 2e-18
Identities = 118/152 (78%), Gaps = 4/152 (3%)
Strand=Plus/Minus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCG--GCAGGCCTCGG 19102
|||||||||| || ||||| ||||| || ||| | ||| |||| || || || ||
Sbjct 494092 AGGACAGCATTGGTGGCACAGTGACCTGTGTGATCAGGAAC-TGCCCAAGC-GGACTTGG 494035
Query 19103 CGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGC 19162
|||||| |||||||||||| ||||||| |||| || || || |||||||| ||||| ||
Sbjct 494034 CGAGCCTTGCTTTGACAAGCTCGAGGCTACGCTGGCACATGCGATGCTGTCAATCCCTGC 493975
Query 19163 CACCAAGGGATTCGAGATTGGCAGCGGGTTTG 19194
|||||| || ||||| || || || || ||||
Sbjct 493974 CACCAAAGGCTTCGAAATCGGAAGTGGCTTTG 493943
Score = 100 bits (110), Expect = 3e-15
Identities = 289/447 (65%), Gaps = 10/447 (2%)
Strand=Plus/Minus
Query 1628159 AAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGG 1628217
|| ||| || |||||||||||||| ||||| | | | | || || ||||||| ||||
Sbjct 2143233 AATACTCGATGATCTCGGTGCACAAGTTGGA-GCTGCGGATAGTGCCAAGGTTCTTCTGG 2143175
Query 1628218 TTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGC 1628277
||| | | |||| || ||||||| ||||||||| || | ||| |||||| | ||
Sbjct 2143174 TTGCTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGA 2143115
Query 1628278 GCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGCGCGCGGCCC 1628334
| | | | ||| || |||||| || | ||| |||| |||| || | || |||
Sbjct 2143114 GACTCAAGGATAGCGTACCAGAGCTTCTGGGCGCGCAC---AGTCTCACGACCACGACCC 2143058
Query 1628335 TNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCA-GGCC 1628393
| ||||| || | || ||| || |||| ||||
Sbjct 2143057 TCGCCCTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATC-TGCAAGGCC 2142999
Query 1628394 GGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAA 1628453
||| ||| ||||| | ||| | ||| ||||| || | | | || ||| ||
Sbjct 2142998 GGGGCACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAA 2142939
Query 1628454 GAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTG 1628513
||| || |||| || ||||| ||||| ||||| || || ||| |||||||||||
Sbjct 2142938 GAGATCTGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTG 2142879
Query 1628514 GTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGC 1628573
||||| ||||||||| || | | | ||||||||||| ||||||| |||| |||
Sbjct 2142878 ATTCTTGCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGC 2142819
Query 1628574 AAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
|| || || || ||| ||||||
Sbjct 2142818 GAATGCACCTGGTCGTTTGTTGCCGCC 2142792
Score = 96.9 bits (106), Expect = 4e-14
Identities = 105/137 (77%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 1627868 CGTCGGCGAGGCC-CTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGG 1627926
|||| || || || ||| || || | ||| || |||| |||||||| |||||| | ||
Sbjct 2143461 CGTCAGCCAGACCACTG-ACTCCAAGGCCGATAGGCCTGTGGCGCATGTTCGACTTACGA 2143403
Query 1627927 GCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACC 1627986
||||| ||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct 2143402 GCCTCCGGCACAGGGTAGTGGTTGATGTCGATGGTTTTGTTGAGGTTCTTGGTAACGACC 2143343
Query 1627987 TGGACGATCTCGTGCAG 1628003
||||||| |||||||||
Sbjct 2143342 TGGACGACCTCGTGCAG 2143326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138051094438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |