Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7 141 1e-27 seq12 125 9e-23 seq11 111 2e-18 >seq7 Length=1646986 Score = 141 bits (156), Expect = 1e-27 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || |||||| | |||||||||||||||||| | ||||||||| | |||||||| | || Sbjct 1152173 CTGTTTGAGATTATCCTCGCCGCCAACTACATGGACATCAAGGCCTTGCTCGATGTCGGT 1152114 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | || || |||||||||||||||||||| || ||||||||||||||||| || Sbjct 1152113 TGCAAGACAGTCGCGAACATGATCAAGGGCAAGTCACCAGAGGAGATCCGCAAGACGTTC 1152054 Query 1592288 AACATCAAGTACG 1592300 ||||| || ||| Sbjct 1152053 AACATTCAGAACG 1152041 >seq12 Length=4887340 Score = 125 bits (138), Expect = 9e-23 Identities = 205/290 (71%), Gaps = 13/290 (4%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | |||||| |||| ||| || ||||||||||| ||||| Sbjct 3658558 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTT 3658499 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||||||||| || ||| |||||||| ||||| |||||||||||||| || Sbjct 3658498 CTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAA 3658439 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | ||||||| || ||| |||||| ||| | |||| ||||||| | || Sbjct 3658438 GGCGATGAGTCGGCAGGCGAAGGTG--GAG----TTTTTGTCGCTGATCCATCGAAGAGC 3658385 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGT-CC 869413 |||||| ||||| || | | | || | ||||||||||| || |||| ||| | Sbjct 3658384 CCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACAGGTAGGTACG 3658325 Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| || || ||| || |||||||| ||||| || || ||||| Sbjct 3658324 CTGTCG--TGGCTCGCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTC 3658277 Score = 113 bits (124), Expect = 6e-19 Identities = 171/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 868693 CTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAA 868752 ||||||||| ||||| || ||| |||||| ||||| |||||||| | |||||||| Sbjct 3658870 CTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTT 3658811 Query 868753 CTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG-A 868811 |||||| | ||| |||||| | ||||||| ||| | || || | || | | Sbjct 3658810 CTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTGTTGCCAAGGG-CGAGCA 3658752 Query 868812 GCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGA 868871 ||||||||| || || || |||||||| ||||||||||| | ||||||||||| | Sbjct 3658751 ACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCCGAGCA 3658692 Query 868872 GCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931 || || || | || ||| ||||||| |||||| ||| |||||| ||||| Sbjct 3658691 ATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGA 3658632 Query 868932 T 868932 | Sbjct 3658631 T 3658631 >seq11 Length=3629084 Score = 111 bits (122), Expect = 2e-18 Identities = 118/152 (78%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCG--GCAGGCCTCGG 19102 |||||||||| || ||||| ||||| || ||| | ||| |||| || || || || Sbjct 494092 AGGACAGCATTGGTGGCACAGTGACCTGTGTGATCAGGAAC-TGCCCAAGC-GGACTTGG 494035 Query 19103 CGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGC 19162 |||||| |||||||||||| ||||||| |||| || || || |||||||| ||||| || Sbjct 494034 CGAGCCTTGCTTTGACAAGCTCGAGGCTACGCTGGCACATGCGATGCTGTCAATCCCTGC 493975 Query 19163 CACCAAGGGATTCGAGATTGGCAGCGGGTTTG 19194 |||||| || ||||| || || || || |||| Sbjct 493974 CACCAAAGGCTTCGAAATCGGAAGTGGCTTTG 493943 Score = 100 bits (110), Expect = 3e-15 Identities = 289/447 (65%), Gaps = 10/447 (2%) Strand=Plus/Minus Query 1628159 AAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGG 1628217 || ||| || |||||||||||||| ||||| | | | | || || ||||||| |||| Sbjct 2143233 AATACTCGATGATCTCGGTGCACAAGTTGGA-GCTGCGGATAGTGCCAAGGTTCTTCTGG 2143175 Query 1628218 TTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGC 1628277 ||| | | |||| || ||||||| ||||||||| || | ||| |||||| | || Sbjct 2143174 TTGCTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGA 2143115 Query 1628278 GCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGCGCGCGGCCC 1628334 | | | | ||| || |||||| || | ||| |||| |||| || | || ||| Sbjct 2143114 GACTCAAGGATAGCGTACCAGAGCTTCTGGGCGCGCAC---AGTCTCACGACCACGACCC 2143058 Query 1628335 TNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCA-GGCC 1628393 | ||||| || | || ||| || |||| |||| Sbjct 2143057 TCGCCCTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATC-TGCAAGGCC 2142999 Query 1628394 GGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAA 1628453 ||| ||| ||||| | ||| | ||| ||||| || | | | || ||| || Sbjct 2142998 GGGGCACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAA 2142939 Query 1628454 GAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTG 1628513 ||| || |||| || ||||| ||||| ||||| || || ||| ||||||||||| Sbjct 2142938 GAGATCTGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTG 2142879 Query 1628514 GTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGC 1628573 ||||| ||||||||| || | | | ||||||||||| ||||||| |||| ||| Sbjct 2142878 ATTCTTGCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGC 2142819 Query 1628574 AAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 || || || || ||| |||||| Sbjct 2142818 GAATGCACCTGGTCGTTTGTTGCCGCC 2142792 Score = 96.9 bits (106), Expect = 4e-14 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 1627868 CGTCGGCGAGGCC-CTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGG 1627926 |||| || || || ||| || || | ||| || |||| |||||||| |||||| | || Sbjct 2143461 CGTCAGCCAGACCACTG-ACTCCAAGGCCGATAGGCCTGTGGCGCATGTTCGACTTACGA 2143403 Query 1627927 GCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACC 1627986 ||||| ||||| |||||||||||||||||||| ||||||||| |||||| Sbjct 2143402 GCCTCCGGCACAGGGTAGTGGTTGATGTCGATGGTTTTGTTGAGGTTCTTGGTAACGACC 2143343 Query 1627987 TGGACGATCTCGTGCAG 1628003 ||||||| ||||||||| Sbjct 2143342 TGGACGACCTCGTGCAG 2143326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138051094438