Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq11 203 3e-47 seq13 89.7 5e-13 seq6 87.8 2e-12 >seq11 Length=3629084 Score = 203 bits (224), Expect = 3e-47 Identities = 621/943 (66%), Gaps = 29/943 (3%) Strand=Plus/Minus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 ||| || || | |||||| || || || || ||||| ||| || |||| || |||| Sbjct 2143274 AATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCGGT 2143215 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 ||||| || | ||| || || | || | || ||||| || ||||||||||| Sbjct 2143214 GCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAGC 2143155 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259 ||| ||||| ||||| || || |||||||| || ||| | ||| || || | | Sbjct 2143154 ATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTC---AAGGATAGCGTA 2143098 Query 139260 CAAGTCCCTA---GCTTGTATTTGACGCACGTAAA-GTTCGTCGCGCTCGTACTTTTCGT 139315 | || | | || | | | | |||| | | | |||| ||| |||| |||| Sbjct 2143097 CCAGAGCTTCTGGGCGCGCACA-GTCTCACGACCACGACCCTCGCCCTCATACTGCTCGT 2143039 Query 139316 AGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACA 139375 |||| | || || || || ||| | || | ||| || | |||| | ||||||| Sbjct 2143038 AGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACA 2142979 Query 139376 TGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAG 139435 |||| | ||| ||||||| | || ||| ||| ||||||| ||||| || ||||| | | Sbjct 2142978 TGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGG 2142919 Query 139436 CGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAG 139493 || | | | |||||| || |||||| || || | | || | | || || Sbjct 2142918 CGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCG-TGATTC-TTGCGGAGGTCGAG 2142861 Query 139494 GAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT 139553 ||| |||| || || ||||||||||| |||| |||||||| | ||| ||| ||||| Sbjct 2142860 GAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTT 2142801 Query 139554 G---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAG 139610 | || || || || |||| ||| | | || ||||| || |||| ||| || | || Sbjct 2142800 GTTGCCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAG 2142741 Query 139611 ACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATG 139667 |||| | | || |||||||||| || |||| | || | ||| || | | ||| Sbjct 2142740 ACCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACT---AGCACGAATGCGATG 2142684 Query 139668 TACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCT 139726 | | |||| |||| || || || ||| || || | | ||||| || | | || | Sbjct 2142683 TGCGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTG-AGCGTGT 2142625 Query 139727 CGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCG 139786 |||| || || |||||||| |||| ||| ||| || |||||||| | || || | Sbjct 2142624 CGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTG 2142565 Query 139787 GTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAAC-ATTTGTTTCGAC 139845 | || ||||| || ||||| || || || ||||| ||||| | ||||| ||| Sbjct 2142564 CTTGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTG-GAC 2142506 Query 139846 ATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACT 139905 || | | ||| ||||||||||| | |||| ||| ||| || |||||||||| || Sbjct 2142505 ATGAGGTTGTAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACA 2142446 Query 139906 CGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAAC 139963 ||||| | ||| || || ||||| || | | ||| ||| || || | Sbjct 2142445 CGCATAATCATGTGCTGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGAT 2142386 Query 139964 CGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || ||| || |||||| | ||||||||| |||||||| || Sbjct 2142385 CG--CTCCAGAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTC 2142345 >seq13 Length=2085791 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 ||||||||| ||||| ||||| || || || || || || || ||||||||||| || || Sbjct 973255 AAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAGCGCTTGATCTTTGCAGGCAA 973314 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||||| |||||| | | | | || ||||| |||||||| ||||| || || || || Sbjct 973315 GCAGCTTGAGGATGGCCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCTACCCTCCA 973374 Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930 | | || | || | ||||| || Sbjct 973375 CCTAGTCCTTCGTCTTCGCGGTGG 973398 >seq6 Length=1630888 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || || || || ||||| || || || |||| || | || | Sbjct 190654 AAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATCGACAAT 190595 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||| || || ||||| || || || || || || |||||| | |||||| Sbjct 190594 GTGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCTTATCTTT 190535 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || ||||| |||||| | | | ||||| || ||||| || ||||| ||| Sbjct 190534 GCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAAGGAGTCG 190475 Query 24899 ACACTACA-CTTG 24910 ||||| || |||| Sbjct 190474 ACACTTCATCTTG 190462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897521267920