Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq12 159 5e-33
seq7 132 8e-25
seq5 93.3 7e-13
seq11 86.0 1e-10
>seq12
Length=4887340
Score = 159 bits (176), Expect = 5e-33
Identities = 238/332 (72%), Gaps = 13/332 (4%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| ||| | |||||| ||| ||| || ||||||||||| |||||
Sbjct 3658558 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTT 3658499
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| ||||||||||| ||| ||| |||||||| ||||| |||||||||||||| ||
Sbjct 3658498 CTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAA 3658439
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGC 794516
| ||| ||| || ||| || ||| || | ||||| ||||||| | ||
Sbjct 3658438 GGCGATGAGTCGGCAGGCGAAGGTG--GAG----TTTTTGTCGCTGATCCATCGAAGAGC 3658385
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGT-CC 794574
||| || ||||| || | | | || | ||||||||||| || |||| ||| |
Sbjct 3658384 CCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACAGGTAGGTACG 3658325
Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634
| ||| || || ||| ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct 3658324 CTGTCG--TGGCTCGCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTCAGAGTGGATG 3658267
Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| || || ||||||||||| || |||||
Sbjct 3658266 TTCTCCATCATAATCTGGAAGCCGTAGAAGCA 3658235
Score = 123 bits (136), Expect = 4e-22
Identities = 195/271 (72%), Gaps = 9/271 (3%)
Strand=Plus/Minus
Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932
|||||||| || || ||| | ||| | |||||| || ||||| || ||| |||||| |
Sbjct 3658895 TCCTCTCCTTC-TCCATG--ATGCCTGACTTGGCGTAGTCGCCGACACGCTTCTCGAAGA 3658839
Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992
|||| |||||||| | |||||||| |||||| | ||| |||||| | | ||
Sbjct 3658838 AGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTTGACAGCGTTGT 3658779
Query 793993 AGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050
||| ||| | || || ||| |||| ||||||||| || |||||||| ||||| ||
Sbjct 3658778 AGTACTTGGTGTTGCCAAGGGCGA-GCAA-CAGGCGGTCAGCAACGAATTCGATGTATTG 3658721
Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACT 794109
||||||||| | ||||||||||| | || || ||| || | || | | ||||
Sbjct 3658720 GCACATGAGCTTAGAGTTCATGCCGAGCAATGCACAAGGG-AGAGCATCCGTCAGGAACT 3658662
Query 794110 CTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
||| |||||| ||| |||||| |||||||
Sbjct 3658661 CTTGCTCGATTGTGACTGCCTCGGTGATGAT 3658631
>seq7
Length=1646986
Score = 132 bits (146), Expect = 8e-25
Identities = 109/133 (82%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| |||||| | |||||||||||||||||| | ||||||||| || | |||||| | ||
Sbjct 1152173 CTGTTTGAGATTATCCTCGCCGCCAACTACATGGACATCAAGGCCTTGCTCGATGTCGGT 1152114
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||||||| || || ||| | |||||||||||||| || ||||| ||||||||||| ||
Sbjct 1152113 TGCAAGACAGTCGCGAACATGATCAAGGGCAAGTCACCAGAGGAGATCCGCAAGACGTTC 1152054
Query 2035749 AACATCAAGTACG 2035761
||||| || |||
Sbjct 1152053 AACATTCAGAACG 1152041
>seq5
Length=971886
Score = 93.3 bits (102), Expect = 7e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| |||| || || || | |
Sbjct 215230 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGCTCACCCGGAAG 215171
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT 1485584
||| ||||| || | |||||||||||| || | | ||| ||| | ||||||
Sbjct 215170 GATGAGGCGGACTGAGGTCTGGATCTCACGCGAGGAGATGGTGCTCTTCTTGTT 215117
>seq11
Length=3629084
Score = 86.0 bits (94), Expect = 1e-10
Identities = 78/96 (81%), Gaps = 2/96 (2%)
Strand=Plus/Minus
Query 2070133 AACGCGTCGGCCAGGCC-CTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTG 2070191
|| ||||| ||||| || ||| || || | ||| || |||| |||||||| |||||| |
Sbjct 2143465 AATGCGTCAGCCAGACCACTG-ACTCCAAGGCCGATAGGCCTGTGGCGCATGTTCGACTT 2143407
Query 2070192 CCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|| ||||| ||||| ||||||||||||||||||||
Sbjct 2143406 ACGAGCCTCCGGCACAGGGTAGTGGTTGATGTCGAT 2143371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916244910756146
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |