Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 159 5e-33 seq7 132 8e-25 seq5 93.3 7e-13 seq11 86.0 1e-10 >seq12 Length=4887340 Score = 159 bits (176), Expect = 5e-33 Identities = 238/332 (72%), Gaps = 13/332 (4%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | |||||| ||| ||| || ||||||||||| ||||| Sbjct 3658558 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTT 3658499 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||||||||| ||| ||| |||||||| ||||| |||||||||||||| || Sbjct 3658498 CTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAA 3658439 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGC 794516 | ||| ||| || ||| || ||| || | ||||| ||||||| | || Sbjct 3658438 GGCGATGAGTCGGCAGGCGAAGGTG--GAG----TTTTTGTCGCTGATCCATCGAAGAGC 3658385 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGT-CC 794574 ||| || ||||| || | | | || | ||||||||||| || |||| ||| | Sbjct 3658384 CCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACAGGTAGGTACG 3658325 Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 | ||| || || ||| ||| |||||||||||||| ||||| ||||| ||||||||| Sbjct 3658324 CTGTCG--TGGCTCGCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTCAGAGTGGATG 3658267 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || || ||||||||||| || ||||| Sbjct 3658266 TTCTCCATCATAATCTGGAAGCCGTAGAAGCA 3658235 Score = 123 bits (136), Expect = 4e-22 Identities = 195/271 (72%), Gaps = 9/271 (3%) Strand=Plus/Minus Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932 |||||||| || || ||| | ||| | |||||| || ||||| || ||| |||||| | Sbjct 3658895 TCCTCTCCTTC-TCCATG--ATGCCTGACTTGGCGTAGTCGCCGACACGCTTCTCGAAGA 3658839 Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992 |||| |||||||| | |||||||| |||||| | ||| |||||| | | || Sbjct 3658838 AGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTTGACAGCGTTGT 3658779 Query 793993 AGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050 ||| ||| | || || ||| |||| ||||||||| || |||||||| ||||| || Sbjct 3658778 AGTACTTGGTGTTGCCAAGGGCGA-GCAA-CAGGCGGTCAGCAACGAATTCGATGTATTG 3658721 Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACT 794109 ||||||||| | ||||||||||| | || || ||| || | || | | |||| Sbjct 3658720 GCACATGAGCTTAGAGTTCATGCCGAGCAATGCACAAGGG-AGAGCATCCGTCAGGAACT 3658662 Query 794110 CTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| |||||| ||| |||||| ||||||| Sbjct 3658661 CTTGCTCGATTGTGACTGCCTCGGTGATGAT 3658631 >seq7 Length=1646986 Score = 132 bits (146), Expect = 8e-25 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 || |||||| | |||||||||||||||||| | ||||||||| || | |||||| | || Sbjct 1152173 CTGTTTGAGATTATCCTCGCCGCCAACTACATGGACATCAAGGCCTTGCTCGATGTCGGT 1152114 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| || || ||| | |||||||||||||| || ||||| ||||||||||| || Sbjct 1152113 TGCAAGACAGTCGCGAACATGATCAAGGGCAAGTCACCAGAGGAGATCCGCAAGACGTTC 1152054 Query 2035749 AACATCAAGTACG 2035761 ||||| || ||| Sbjct 1152053 AACATTCAGAACG 1152041 >seq5 Length=971886 Score = 93.3 bits (102), Expect = 7e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| || || || | | Sbjct 215230 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGCTCACCCGGAAG 215171 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT 1485584 ||| ||||| || | |||||||||||| || | | ||| ||| | |||||| Sbjct 215170 GATGAGGCGGACTGAGGTCTGGATCTCACGCGAGGAGATGGTGCTCTTCTTGTT 215117 >seq11 Length=3629084 Score = 86.0 bits (94), Expect = 1e-10 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 2070133 AACGCGTCGGCCAGGCC-CTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTG 2070191 || ||||| ||||| || ||| || || | ||| || |||| |||||||| |||||| | Sbjct 2143465 AATGCGTCAGCCAGACCACTG-ACTCCAAGGCCGATAGGCCTGTGGCGCATGTTCGACTT 2143407 Query 2070192 CCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 || ||||| ||||| |||||||||||||||||||| Sbjct 2143406 ACGAGCCTCCGGCACAGGGTAGTGGTTGATGTCGAT 2143371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244910756146