Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq13 125 5e-24
seq12 118 7e-22
seq6 104 2e-17
>seq13
Length=2085791
Score = 125 bits (138), Expect = 5e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || || | || |||| || || ||||| || |||||
Sbjct 973591 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAA 973532
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| ||||||||| | || | ||||||||||| | || || ||||||
Sbjct 973531 GATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 973472
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| || ||| || |||| ||| |||||||| || || || ||||| ||
Sbjct 973471 GTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 973412
Query 34966 AAAGATCTGCAT 34977
|||||| |||||
Sbjct 973411 AAAGATTTGCAT 973400
Score = 105 bits (116), Expect = 4e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||||||||| || ||||| ||| |||| ||||
Sbjct 973383 AGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCC 973324
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||||| || |||||||| | || | || ||||||||
Sbjct 973323 TCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCC 973264
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| |||||| | || | || || |||||| |||| ||| ||||||
Sbjct 973263 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTC 973204
Query 34946 TTTCCCGT 34953
|| || ||
Sbjct 973203 TTGCCAGT 973196
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||||||||||||||||||||| ||||| || | | || | ||
Sbjct 973839 AGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCC 973780
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| |||||||| || || ||||| ||| | || | |||||||||||
Sbjct 973779 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCT 973720
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || | |||||| || | || ||
Sbjct 973719 TGAATCTTGCTCTTCAC--AT--TGTCGATTGTGTCCGATGACTCGACTTCTAATGTAAT 973664
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || ||||| ||||| || ||||| |||||
Sbjct 973663 AGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 118 bits (130), Expect = 7e-22
Identities = 144/194 (74%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| |||| ||||||||| ||||| ||||| || || |||| | ||
Sbjct 1403597 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCC 1403656
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||||||||||||||| || ||||||||| | || | |||||||||||
Sbjct 1403657 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCT 1403716
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| ||||| || | ||||| || | ||| || || | ||| ||
Sbjct 1403717 TGAATCTTTGACTTGAC--AT--TGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGAT 1403772
Query 34942 GGTCTTTCCCGTGA 34955
||||| |||||||
Sbjct 1403773 AGTCTTACCCGTGA 1403786
>seq6
Length=1630888
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 8/211 (4%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || || || |||| || ||||||||| ||||| ||||| || || |||| ||
Sbjct 190455 CTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCA 190514
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||||||||| ||||| || |||||||||||| | || | ||||| ||
Sbjct 190515 TCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTA 190574
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938
|| | || || || || || | ||||| || || ||| || || | |||
Sbjct 190575 TCCTGAATCTTGCTCTTCAC--AT--TGTCGATAGTATCGGAGGACTCAACCTCGAGGGT 190630
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969
|||||||| |||||||||||||| || |||
Sbjct 190631 GATGGTCTTGCCCGTGAGGGTCTTCACGAAG 190661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692744428666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |