Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq13 125 5e-24 seq12 118 7e-22 seq6 104 2e-17 >seq13 Length=2085791 Score = 125 bits (138), Expect = 5e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || |||| || || ||||| || ||||| Sbjct 973591 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAA 973532 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 973531 GATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 973472 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| || ||| || |||| ||| |||||||| || || || ||||| || Sbjct 973471 GTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 973412 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 973411 AAAGATTTGCAT 973400 Score = 105 bits (116), Expect = 4e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||||||||| || ||||| ||| |||| |||| Sbjct 973383 AGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCC 973324 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||||| || |||||||| | || | || |||||||| Sbjct 973323 TCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCC 973264 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | || | || || |||||| |||| ||| |||||| Sbjct 973263 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTC 973204 Query 34946 TTTCCCGT 34953 || || || Sbjct 973203 TTGCCAGT 973196 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||||||||||||||||||||| ||||| || | | || | || Sbjct 973839 AGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCC 973780 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||| || || ||||| ||| | || | ||||||||||| Sbjct 973779 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCT 973720 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | |||||| || | || || Sbjct 973719 TGAATCTTGCTCTTCAC--AT--TGTCGATTGTGTCCGATGACTCGACTTCTAATGTAAT 973664 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| ||||| || ||||| ||||| Sbjct 973663 AGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq12 Length=4887340 Score = 118 bits (130), Expect = 7e-22 Identities = 144/194 (74%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| |||| ||||||||| ||||| ||||| || || |||| | || Sbjct 1403597 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCC 1403656 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 1403657 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCT 1403716 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| ||||| || | ||||| || | ||| || || | ||| || Sbjct 1403717 TGAATCTTTGACTTGAC--AT--TGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGAT 1403772 Query 34942 GGTCTTTCCCGTGA 34955 ||||| ||||||| Sbjct 1403773 AGTCTTACCCGTGA 1403786 >seq6 Length=1630888 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || || || |||| || ||||||||| ||||| ||||| || || |||| || Sbjct 190455 CTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCA 190514 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || ||||||||||| ||||| || |||||||||||| | || | ||||| || Sbjct 190515 TCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTA 190574 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938 || | || || || || || | ||||| || || ||| || || | ||| Sbjct 190575 TCCTGAATCTTGCTCTTCAC--AT--TGTCGATAGTATCGGAGGACTCAACCTCGAGGGT 190630 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 |||||||| |||||||||||||| || ||| Sbjct 190631 GATGGTCTTGCCCGTGAGGGTCTTCACGAAG 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692744428666