Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-18 seq11 87.8 1e-11 >seq4 Length=2770911 Score = 111 bits (122), Expect = 1e-18 Identities = 508/795 (64%), Gaps = 8/795 (1%) Strand=Plus/Minus Query 282026 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 282085 |||||||| | ||| || | || || | || || | || ||||| || | ||| || Sbjct 1145233 CCTTCGAAGAGAGAGTCGATCTCGATGGATGTCTGTGCAGACGAAGAGAGCGTACGCTTG 1145174 Query 282086 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG-ATTCAAATCTGT 282144 ||||| ||||| || || | || | ||| | ||| ||| | ||| | |||||||| | Sbjct 1145173 GCACGCTCACAGGCAGTTCGGAGACGTCGAAGAGCTCGTGC-GTTTGTAGTCAAATCTTT 1145115 Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTC 282204 || | || | ||||| || | ||| | | || || | || || || || || Sbjct 1145114 CTTGTGCTTGCGTTTGAACTCGTTAACGAAGTGGTTGACCAGTCTGTTGTCGAAGTCCTC 1145055 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 282264 ||| |||| | ||| | ||| | |||| | || | ||| | || || || | | Sbjct 1145054 ACCACCCAGGTGAGTGTCTCCAGCAGTAGACTTGACCTCGAAGATGCCCTCCTCGATGGT 1144995 Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 | ||||| ||||| ||| || ||||||| || || || || || || || Sbjct 1144994 GAGAAGAGAGACATCGAAGGTACCTCCACCCAAGTCGAAGATCAGAACGTTACGCTCGCC 1144935 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 || || || || || || || |||| |||||||||||||| || || || || | Sbjct 1144934 CTCAGTCTTCTTGTCGAGGCCGTAGGCAATGGCAGCAGCAGTTGGCTCGTTGATGATACG 1144875 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 | || || || |||||||| ||||| || ||||||||||||| || || ||||| Sbjct 1144874 GAGGACGTTGAGGCCAGCAATGAGACCTGCGTCCTTAGTGGCTTGTCGCTGAGAGTCGTT 1144815 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTG 282503 || ||||| || ||||| | || || | |||| ||| ||| | || | || Sbjct 1144814 GAAGTATGCTGGTACAGTGACGACAGCGT-TGTTAACTGTGCCTCCCAGGTATGACTCTG 1144756 Query 282504 CTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG 282563 |||| | | ||| || | | | ||| || || || | ||||| | | | ||||| Sbjct 1144755 CTGTCTCTCGCATCTTTGTGAGGACCATCGAGGAGATCTCCTCTGGTGTGAACTCCTTGG 1144696 Query 282564 ATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAAT 282622 || |||| | | || | || | ||| ||| | | | || || || ||| Sbjct 1144695 TCTCGCCCTTGAACTCA-ACCTGAATAACTGGCTTAGCAGCCTTGTCGATGACCTTGAAT 1144637 Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCG 282681 || | | ||||| || | || || || | ||| || | | ||||| | || Sbjct 1144636 GGGAAGTGCTTCATGTCGGCCTGCAC-CTCAGCGTCTGCGAACTTGCGGCCAATGAGGCG 1144578 Query 282682 TTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCC 282741 |||||||| || | ||| ||| |||| || | || |||| | ||||| |||||||| Sbjct 1144577 CTTTGCATCGAAGACAGTGTTGATTGGGTTCATGGCGACTTGGTTCTTGGCAGCATCTCC 1144518 Query 282742 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 || ||| | || || ||||| || | || | || || || || || || || || || Sbjct 1144517 GATAAGACGCTCAGTGTCTGTGAAGGCGACGAAGGAAGGTGTCGTTCGGTTTCCCTGGTC 1144458 Query 282802 ATTCGCAATAATTTC 282816 || ||||| ||||| Sbjct 1144457 GTTTGCAATGATTTC 1144443 >seq11 Length=3629084 Score = 87.8 bits (96), Expect = 1e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 432280 GATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGT 432339 || ||| || || || |||||| ||||||| ||| | ||||| ||||||||||| | | Sbjct 580548 GACTGAAAGCCAAGGATGGTCGTCTTAGAGGCAATCTCATGGGCAAGCGTGTCGACTTCT 580489 Query 432340 CTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 | |||||||| || || ||| |||||| || ||| |||| |||| ||||| || || Sbjct 580488 CAGCACGTACCGTCATCACTGGTGATCCAAACCTTGATCTCGATGAGGTTGGAGTGCC 580431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629712659164