Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq13 105 1e-17 seq12 96.9 7e-15 >seq13 Length=2085791 Score = 105 bits (116), Expect = 1e-17 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||| || || ||||| || || || ||||| | | | || Sbjct 973843 ACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCC 973784 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || |||||||| ||||| || | || |||||||| || || || ||||| Sbjct 973783 GTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTT 973724 Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 ||||||||| ||||| || ||||| || || || || | || ||||| || || | Sbjct 973723 GTCTTGAATC-TTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAA 973665 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || | ||||| || || || ||||| Sbjct 973664 TAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq12 Length=4887340 Score = 96.9 bits (106), Expect = 7e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || || || ||| | | |||| Sbjct 1403594 CGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCG 1403653 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| || ||||| || | || || ||||| ||||| || ||||| Sbjct 1403654 TCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTG 1403713 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||||| || ||||| || || || || || || || || | || || Sbjct 1403714 TCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATA 1403773 Query 82776 GTCTTGCCTGT 82786 ||||| || || Sbjct 1403774 GTCTTACCCGT 1403784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827023884746