Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq13 105 1e-17
seq12 96.9 7e-15
>seq13
Length=2085791
Score = 105 bits (116), Expect = 1e-17
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||||| || || ||||| || || || ||||| | | | ||
Sbjct 973843 ACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCC 973784
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || |||||||| ||||| || | || |||||||| || || || |||||
Sbjct 973783 GTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTT 973724
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
||||||||| ||||| || ||||| || || || || | || ||||| || || |
Sbjct 973723 GTCTTGAATC-TTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAA 973665
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || | ||||| || || || |||||
Sbjct 973664 TAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 96.9 bits (106), Expect = 7e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || || || ||| | | ||||
Sbjct 1403594 CGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCG 1403653
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || ||||| || ||||| || | || || ||||| ||||| || |||||
Sbjct 1403654 TCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTG 1403713
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||||| || ||||| || || || || || || || || | || ||
Sbjct 1403714 TCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATA 1403773
Query 82776 GTCTTGCCTGT 82786
||||| || ||
Sbjct 1403774 GTCTTACCCGT 1403784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981827023884746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |