Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq11 203 3e-47
seq13 107 2e-18
seq12 96.9 3e-15
seq6 82.4 7e-11
>seq11
Length=3629084
Score = 203 bits (224), Expect = 3e-47
Identities = 627/954 (66%), Gaps = 31/954 (3%)
Strand=Plus/Minus
Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880
|| ||||| || || ||||| || || |||||| || |||| ||||| | |||||||
Sbjct 2143276 GCAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCG 2143217
Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940
| ||||| ||| || ||| ||| | |||||| || |||||||||| ||| ||
Sbjct 2143216 GTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAA 2143157
Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGA 149000
|| |||||||| |||||||| || |||||| || || | || | || | ||
Sbjct 2143156 GCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGAT--AGCGT 2143099
Query 149001 TGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTCGTATAAAGTA 149057
||| | ||| |||||||| || | || |||||||| ||| ||
Sbjct 2143098 ACCAGAGCTTCTGGGCGCGCACAGTCT-CACGACCACGACCCTCGCCCTCATACTGCTCG 2143040
Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117
|| ||| ||| ||| |||| || ||| ||| | || |||||||||| | || |||
Sbjct 2143039 TAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACAC 2142980
Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177
||||| | |||| |||||| | | || |||||||| || ||||| || | ||||||
Sbjct 2142979 ATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGG 2142920
Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237
||||| | ||| ||||| || ||||| ||| || ||| |||| |||
Sbjct 2142919 GCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGG 2142860
Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG 149297
| | || | || |||||||| ||||| | ||| | |||| || || || |||
Sbjct 2142859 AAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTG 2142800
Query 149298 ---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354
||||||||||| |||| || | ||||||| |||||||| | |||||| | |
Sbjct 2142799 TTGCCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGA 2142740
Query 149355 CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCA--CTTTGTGCA 149412
|| ||| |||||||| || || ||| || | || || | | ||||
Sbjct 2142739 CCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTG-- 2142682
Query 149413 CGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAG 149471
|||||| |||| ||| || | | |||||||| |||| |||| |||||| |
Sbjct 2142681 CGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTC-TTGAGCGTGTCG 2142623
Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531
||||||||||| |||||||| ||||||| | || ||||| || | || |
Sbjct 2142622 TAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT 2142563
Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591
| ||||| || || || | || || ||||||||| || || || | | |||
Sbjct 2142562 TGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATG 2142503
Query 149592 ATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649
| | ||| | |||| ||| || || ||||| || ||||| || || | || || |
Sbjct 2142502 AGGTTGTAAGTTTCGATGGCA-GC-CTCAATGTCCTCTCCATGTATACCGACAGCCACAC 2142445
Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709
|||| | ||| ||||| ||||| || || | | || || | || ||||| || ||
Sbjct 2142444 GCATAATCATGTGCTGTGGTCGTTCTGCAA---TCTTGCCGCTGATGCGCAAG-AG--GT 2142391
Query 149710 TT------TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757
| || || |||||| | |||||||||| ||||| ||||| ||| |||
Sbjct 2142390 ATGATCGCTCCAGAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGT 2142337
>seq13
Length=2085791
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || || | | | ||||| |||||||| ||
Sbjct 973596 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCA-TCCTCAAGCTGCTTACC 973538
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| || || ||||| |||||||| ||||| |||
Sbjct 973537 AGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTT 973478
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||| | || ||| || || | ||||| ||| ||||| ||||||||
Sbjct 973477 GACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 973418
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || || |||||
Sbjct 973417 CTTGACAAAGATTTGCAT 973400
Score = 93.3 bits (102), Expect = 4e-14
Identities = 127/175 (73%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || |||||||| | ||| | | | ||||| ||||||||||
Sbjct 973369 GGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 973311
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || | ||||||||||| || || |||||||||||||| ||||||| ||
Sbjct 973310 CTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTTGACT 973251
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | || | || || | || ||| || || | ||||| ||| ||||| ||
Sbjct 973250 TGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 973196
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | |||| ||| ||||| || ||||| || || ||| ||| ||||||||
Sbjct 973833 AAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGT--ACGGCCGTCCTCGA 973776
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || ||| | ||||| |||||||| || || || || || |||||||| |
Sbjct 973775 GCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAA 973716
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||| | | || | ||||| | | ||| || || | || | || ||||
Sbjct 973715 TCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGC 973656
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| || ||||| || |||||
Sbjct 973655 CAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq12
Length=4887340
Score = 96.9 bits (106), Expect = 3e-15
Identities = 128/175 (73%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| ||| |||||| |||||||| |
Sbjct 1403611 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACC-GTCCTCAAGCTGCTTTC 1403669
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || || ||||| |||||||| |||||| ||
Sbjct 1403670 CGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGAATCTTTGACT 1403729
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | || | ||||| | | |||||| |||| ||||| || || || ||
Sbjct 1403730 TGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784
>seq6
Length=1630888
Score = 82.4 bits (90), Expect = 7e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| || | |||| | | | |||||||||||||| ||
Sbjct 190473 GTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCA-TCCTCGAGCTGCTTTCC 190531
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || || |||||||| || || ||||| || || || ||||| |||
Sbjct 190532 GGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCCTGAATCTTGCTCTT 190591
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || |||| || ||| || |||| ||||| ||| ||||| || || ||
Sbjct 190592 CACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 190651
Query 133643 TTTTACGAA 133651
|| |||||
Sbjct 190652 CTTCACGAA 190660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420715401360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |