Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 203 3e-47 seq13 107 2e-18 seq12 96.9 3e-15 seq6 82.4 7e-11 >seq11 Length=3629084 Score = 203 bits (224), Expect = 3e-47 Identities = 627/954 (66%), Gaps = 31/954 (3%) Strand=Plus/Minus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 || ||||| || || ||||| || || |||||| || |||| ||||| | ||||||| Sbjct 2143276 GCAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCG 2143217 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | ||||| ||| || ||| ||| | |||||| || |||||||||| ||| || Sbjct 2143216 GTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAA 2143157 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGA 149000 || |||||||| |||||||| || |||||| || || | || | || | || Sbjct 2143156 GCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGAT--AGCGT 2143099 Query 149001 TGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTCGTATAAAGTA 149057 ||| | ||| |||||||| || | || |||||||| ||| || Sbjct 2143098 ACCAGAGCTTCTGGGCGCGCACAGTCT-CACGACCACGACCCTCGCCCTCATACTGCTCG 2143040 Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 || ||| ||| ||| |||| || ||| ||| | || |||||||||| | || ||| Sbjct 2143039 TAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACAC 2142980 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 ||||| | |||| |||||| | | || |||||||| || ||||| || | |||||| Sbjct 2142979 ATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGG 2142920 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 ||||| | ||| ||||| || ||||| ||| || ||| |||| ||| Sbjct 2142919 GCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGG 2142860 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG 149297 | | || | || |||||||| ||||| | ||| | |||| || || || ||| Sbjct 2142859 AAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTG 2142800 Query 149298 ---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 ||||||||||| |||| || | ||||||| |||||||| | |||||| | | Sbjct 2142799 TTGCCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGA 2142740 Query 149355 CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCA--CTTTGTGCA 149412 || ||| |||||||| || || ||| || | || || | | |||| Sbjct 2142739 CCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTG-- 2142682 Query 149413 CGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAG 149471 |||||| |||| ||| || | | |||||||| |||| |||| |||||| | Sbjct 2142681 CGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTC-TTGAGCGTGTCG 2142623 Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 ||||||||||| |||||||| ||||||| | || ||||| || | || | Sbjct 2142622 TAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT 2142563 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 | ||||| || || || | || || ||||||||| || || || | | ||| Sbjct 2142562 TGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATG 2142503 Query 149592 ATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 | | ||| | |||| ||| || || ||||| || ||||| || || | || || | Sbjct 2142502 AGGTTGTAAGTTTCGATGGCA-GC-CTCAATGTCCTCTCCATGTATACCGACAGCCACAC 2142445 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 |||| | ||| ||||| ||||| || || | | || || | || ||||| || || Sbjct 2142444 GCATAATCATGTGCTGTGGTCGTTCTGCAA---TCTTGCCGCTGATGCGCAAG-AG--GT 2142391 Query 149710 TT------TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 | || || |||||| | |||||||||| ||||| ||||| ||| ||| Sbjct 2142390 ATGATCGCTCCAGAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGT 2142337 >seq13 Length=2085791 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| || || | | | ||||| |||||||| || Sbjct 973596 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCA-TCCTCAAGCTGCTTACC 973538 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 973537 AGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTT 973478 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || ||| || || | ||||| ||| ||||| |||||||| Sbjct 973477 GACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 973418 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 973417 CTTGACAAAGATTTGCAT 973400 Score = 93.3 bits (102), Expect = 4e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || |||||||| | ||| | | | ||||| |||||||||| Sbjct 973369 GGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 973311 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||| || || |||||||||||||| ||||||| || Sbjct 973310 CTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTTGACT 973251 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | || || | || ||| || || | ||||| ||| ||||| || Sbjct 973250 TGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 973196 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | |||| ||| ||||| || ||||| || || ||| ||| |||||||| Sbjct 973833 AAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGT--ACGGCCGTCCTCGA 973776 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||| || ||| | ||||| |||||||| || || || || || |||||||| | Sbjct 973775 GCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAA 973716 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||||| | | ||| || || | || | || |||| Sbjct 973715 TCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGC 973656 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| || ||||| Sbjct 973655 CAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq12 Length=4887340 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| ||| |||||| |||||||| | Sbjct 1403611 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACC-GTCCTCAAGCTGCTTTC 1403669 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || ||||| |||||||| |||||| || Sbjct 1403670 CGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGAATCTTTGACT 1403729 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | ||||| | | |||||| |||| ||||| || || || || Sbjct 1403730 TGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784 >seq6 Length=1630888 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | |||| | | | |||||||||||||| || Sbjct 190473 GTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCA-TCCTCGAGCTGCTTTCC 190531 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || |||||||| || || ||||| || || || ||||| ||| Sbjct 190532 GGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCCTGAATCTTGCTCTT 190591 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || |||| || ||| || |||| ||||| ||| ||||| || || || Sbjct 190592 CACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 190651 Query 133643 TTTTACGAA 133651 || ||||| Sbjct 190652 CTTCACGAA 190660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420715401360