Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 107 5e-18 seq6 98.7 2e-15 >seq12 Length=4887340 Score = 107 bits (118), Expect = 5e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251 |||| || || || ||||| | || ||||| ||| |||||| |||| || ||| Sbjct 1403786 TCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGT 1403727 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 |||||||||||| || || || || || ||| || | || ||||||||||||| Sbjct 1403726 CAAAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAA 1403667 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 ||||| | || || || | ||| | |||| |||||| ||||||| ||||| || |||| Sbjct 1403666 AGCAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 1403607 Query 206372 ACCTTGTTTTGAGACTTCG 206390 |||| || | ||||||| Sbjct 1403606 ACCTGGTCCTACGACTTCG 1403588 >seq6 Length=1630888 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| | || || || || || || |||| Sbjct 190654 AAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATCGACAAT 190595 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || ||||| || ||| || ||| ||| | |||||||| Sbjct 190594 GTGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCTTATCTTT 190535 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || ||||| | || | | || |||||| ||||||| ||||| Sbjct 190534 GCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAAGGAGTCG 190475 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| ||||| | ||||||||| Sbjct 190474 ACACTTCATCTTGTGCTCAGACTTCGA 190448 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||||||||| | ||||| ||||| || ||||| ||||||| || ||||| | | || Sbjct 190448 TCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGT 190507 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| || |||||||||||||| |||||||| ||||| || Sbjct 190508 GCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTG 190552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820588010894