Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 179 5e-39 seq11 105 1e-16 >seq12 Length=4887340 Score = 179 bits (198), Expect = 5e-39 Identities = 355/514 (69%), Gaps = 26/514 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||||||||| || || ||||| || ||||| | |||| Sbjct 3658021 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCGTCATTCTGGACGGCTGAGGAAATTGACC 3658079 Query 1455835 TCG----GCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| || ||| |||||| |||||| ||| Sbjct 3658080 TGTCAAAGGACCTTCACG----ACTGGAACAAGCGATTGAACGACGATGAGCGCTTCTTC 3658135 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||||| || || || ||| || || || || ||||| ||||||||| | Sbjct 3658136 GTCTCTCACGTGCTTGCATTCTTT-GCTGCATCTGACGGAATCGTCAACGAGAACCTCGT 3658194 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | |||||||| | |||||||| || | || ||||| |||||||| Sbjct 3658195 CGAACGATTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGATGCTTCTACGGCTTCCAGAT 3658254 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || |||||||||||||| || ||||| ||||| |||||||| ||| ||| || Sbjct 3658255 TATGATGGAGAACATCCACTCTGAGACATACTCTCTCCTCATCGACACATACATCAGCGA 3658314 Query 1456068 CCCGGTCGAGA-AGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || ||| | | ||| |||| || ||||||||||| | || | | | || Sbjct 3658315 GCC--ACGACAGCGTACCTACCTGTTCAACGCCATCGACAACATTCCATGCATCCGTAAG 3658372 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| |||||||| | ||||||| |||| | ||| || ||| ||| | Sbjct 3658373 AAGGCTGACTGGGCTCTTCGATGGATCAGCGACAAAAA----CTCCAC-CTTCGCCTGCC 3658427 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | ||| ||| ||| |||| ||||||||| ||||| |||||||| ||| || |||| Sbjct 3658428 GACTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCT 3658487 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||| |||||||| ||||||||||| || || Sbjct 3658488 TTTGGCTGAAGAAGCGTGGCCTCATGCCAGGGCT 3658521 Score = 95.1 bits (104), Expect = 2e-13 Identities = 176/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| |||||| ||| |||||| ||||||| | | || | || || || Sbjct 3658631 ATCATCACCGAGGCAGTCACAATCGAGCAAGAGTTCCTGACGGATGCTCTCCCTTGTGCA 3658690 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 | ||||||||||| | | |||||||||||| ||||| ||| || || || ||||||| Sbjct 3658691 TTGCTCGGCATGAACTCTAA-GCTCATGTGCCAATACATCGAA-TTCGTTGCTGACCGCC 3658748 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 || | || || ||| | ||| ||||| | | |||||| ||| | ||| Sbjct 3658749 TGTTGCTCGCCCTTGGCAAC-ACCAAGTACTACAACGCTGTCAACCCATTCGACTTCATG 3658807 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| |||||||| | |||||||| ||||| |||||| || || ||||| |||||| Sbjct 3658808 GAGAACATCTCGCTTGCTGGCAAGACGAACTTCTTCGAGAAGCGTGTCGGCGACTACGCC 3658867 Query 1456762 AAGGCCGGCGTCA 1456774 ||| | ||| ||| Sbjct 3658868 AAGTCAGGCATCA 3658880 >seq11 Length=3629084 Score = 105 bits (116), Expect = 1e-16 Identities = 181/263 (69%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 |||| ||||||||| || ||||| || | | ||| | || ||||| || | | Sbjct 2142532 CGCCAACGCTCTTTGCCGCTGGCACACCACAAGCACAGCTCGCATCATGCTTCCTTGTCG 2142591 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 ||||||||| || || ||||||||||| |||||||||||| ||||| | |||| Sbjct 2142592 ACATGAAGGAGGACAGCATTGAGGGCATCTACGACACGCTCAAGACTTGCGCTATGATCT 2142651 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 | || || || ||| ||||| | |||||| | || || || | ||| Sbjct 2142652 CAAAAAATGCTGGTGGCGTCGGTCTCAACGCACATCGCATTCGTGCTAGTGGTTCATACA 2142711 Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162 | |||||||||||| ||||||||| || || || ||||| || || || ||| ||| Sbjct 2142712 TCAGTGGCACCAACGGCACGTCCAACGGTCTCGTCCCTATGCTGCGAGTGTTCAACAACA 2142771 Query 260163 CGGCGCGCTACGTCGACCAGTGC 260185 | || || ||||| |||||| || Sbjct 2142772 CCGCCCGATACGTTGACCAGGGC 2142794 Score = 86.0 bits (94), Expect = 9e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 262079 GTGCCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCC 262138 |||| ||| | || |||||| || || | | | | || | |||||| ||||| || Sbjct 2143077 GTGCGCGCCCAGAAGCTCTGGTACGCTATCCTTGAGTCTCAAACCGAGACTGGCACCCCA 2143136 Query 262139 TACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-C 262197 |||||| |||||||||| || |||| | ||||||||| ||||||| ||||| | | Sbjct 2143137 TACATGCTCTACAAGGATGCTTGTAACCGCAAGAGCAACCAGAAGAACCTTGGCACTATC 2143196 Query 262198 GACAGAGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGT 262257 ||| ||||| |||||||||||||| || ||| || | ||| |||| ||| Sbjct 2143197 CGCAGCT-CCAACTTGTGCACCGAGATCATCGAGTATTGCGCACCCGATGAGGTTGCTGT 2143255 Query 262258 GTGCAACCT 262266 |||||||| Sbjct 2143256 CTGCAACCT 2143264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809849674268