Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq13 111 1e-19
seq12 87.8 2e-12
>seq13
Length=2085791
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| |||| || || || | || || ||||||||||| || ||
Sbjct 973591 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAA 973532
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | |||| || |||||||||| ||||| ||| | ||
Sbjct 973531 GATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 973473
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| || || ||||| | ||||| || || || |||| ||| || |
Sbjct 973472 TGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 973413
Query 35724 CAAATATCTGCAT 35736
|||| || |||||
Sbjct 973412 CAAAGATTTGCAT 973400
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || || || |||||||| ||||||||||| || | |
Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || |||| || |||||||| || || || || | |||||||| || | |||
Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||||| ||||| | | | | ||||| || || ||
Sbjct 973734 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACT 973675
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || || || || || | ||| || || || || |||||
Sbjct 973674 TCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
Score = 93.3 bits (102), Expect = 4e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| | | ||| || | || || |||||||| || |||||
Sbjct 973363 CTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAA 973304
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653
||||| ||||||||||| | |||| || ||||||||| |||||||
Sbjct 973303 GATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTT 973255
>seq12
Length=4887340
Score = 87.8 bits (96), Expect = 2e-12
Identities = 120/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | || || |||| || |||||||| || || ||
Sbjct 1403617 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAA 1403676
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | || | || ||||||||| |||||| ||| | | |
Sbjct 1403677 GATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGAATCTTTGACTTGACATT 1403736
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||| || |||||||| | ||||| || ||||||||
Sbjct 1403737 GTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793521111120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |