Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq11 138 2e-27 >seq11 Length=3629084 Score = 138 bits (152), Expect = 2e-27 Identities = 468/723 (65%), Gaps = 6/723 (1%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || || ||||| | ||||| | | || || || |||||||||||||| | | | Sbjct 2143030 TCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTC 2142971 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 ||| | | | || || || ||||| || ||||| || ||||| || || ||| Sbjct 2142970 CACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAAG 2142911 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | | | | ||||| || || ||| || || ||||| || | | Sbjct 2142910 AGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGGCAAAC 2142851 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| | |||||||| || | || || || | | || |||||||| || || ||| Sbjct 2142850 ACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCC 2142791 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | ||||| ||| ||||| || | |||| |||||| || | | ||| || || Sbjct 2142790 TGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGAC 2142731 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACC 69875 | || || || ||| || || || || || ||||| | | | | ||||| Sbjct 2142730 GTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGA-TGTGCGTTGAGACC 2142672 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 | || || || |||| ||||| | ||| ||| || | ||||| || || ||||| Sbjct 2142671 GACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGCCCTC 2142612 Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACA-GCT-AGACATTTGATGATGTATAGTT 69993 ||||| || || |||||| | ||| || || | | || | || | ||| || Sbjct 2142611 AATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT--TGTGGTGTG 2142554 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || || ||| | || || || ||||| ||||| | || | || | || ||||| Sbjct 2142553 CCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTGTAA 2142494 Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113 ||||| || || | || || ||| ||| || || | || |||||||| | ||| Sbjct 2142493 GTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATCATG 2142434 Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173 ||||| ||||||||| | | || | || ||| ||||||||| |||||||| Sbjct 2142433 TGCTGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGAGTC 2142374 Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTA 70233 || || ||||| || | ||| ||||||| ||||| | || |||| || || | | Sbjct 2142373 TTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTACACGATGGCAGAGTTCAGCTCA 2142314 Query 70234 TCC 70236 ||| Sbjct 2142313 TCC 2142311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908679790960