Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11 187 3e-42 seq12 98.7 1e-15 >seq11 Length=3629084 Score = 187 bits (206), Expect = 3e-42 Identities = 1124/1775 (63%), Gaps = 41/1775 (2%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCG-CCTTTGATCGGAGATAGTACATCCCGGTCTTGAGT 110389 ||||||| |||||| | || || || ||| ||| || |||||||| || |||||||| Sbjct 2144181 TGAACTGGATTGGT-GCACTGGCGGCCATTGTTCGAAGGTAGTACATGCCAGTCTTGAGA 2144123 Query 110390 CCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATG 110449 || | ||||| | | |||||||| | | |||| ||| ||||| | |||| Sbjct 2144122 CCGAGCTTCCAACCAGTGAAGTGCATAGATGTTATCTTGCCCATAGTTGGCTCCTTCATG 2144063 Query 110450 AAGAGGTTCATACTTTGACTTTGGTCAATGAA-GCGCCCCCGTTGTGCCGCCATAT---C 110505 || ||||| ||||||||| ||||||||||| ||||| | | | || ||||| | | Sbjct 2144062 TGGATGTTCAGACTTTGACTCTGGTCAATGAAAGCGCCTC-GATCAGCAGCCATCTGCAC 2144004 Query 110506 AATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGG 110565 ||| || || | ||| ||||| || || || || || | || || || Sbjct 2144003 AATTTG-TCGTTGAGA--AATCTCCCAGACCGTCTTGTATAGTGCTTTCAGGTCGTCAGG 2143947 Query 110566 GATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTT 110625 ||||| | || ||| | ||||| || | | ||| | | |||||| | | Sbjct 2143946 GATATTCGGAATTCGCTGAACAGAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTGTC 2143887 Query 110626 GGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTC 110685 | ||| |||||| | |||||| |||| || |||||||| || || Sbjct 2143886 GCTCCAAAGACCACGGTCAACGAGGTCCTTGAGCAGCCATGGGTTGACAACTTGGAATTC 2143827 Query 110686 ACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATT 110745 ||| || | | | || ||||| | |||||||| || ||||| || || Sbjct 2143826 ACCAGCCAACACACGCCGAGAATAAATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGAA 2143767 Query 110746 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 110805 |||| ||| || ||| ||||| ||||||||||||||||| | ||| ||| || | Sbjct 2143766 GCCCATGATCTGACTGGTCGAGGCAGTTGGCATTGGTGCCATGAGCAGAGAGTTTCGTAC 2143707 Query 110806 ACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAG----TTGAGCTTGGTTT 110861 ||| | | ||| ||||||| |||||||||| | |||| ||| | Sbjct 2143706 ACCGTGTTGTGCGATCTTAGCCTTGAGTGCATCCCAGTCCCACAAGTTTGA---TGGAGT 2143650 Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921 || |||| ||||||| |||| ||| | || | |||| | ||||| || || | || | Sbjct 2143649 GACATTCC-ACATGTCGTACTGGAGCTCGCCCTTGGACACTGGAGAGCCTTCGTATGTCT 2143591 Query 110922 CATAGGAACCTTGGGCTT--CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACAT 110979 | || | ||| | ||| |||| | ||||| || ||| | || |||||||| Sbjct 2143590 CGTACGTACCAAG--CTTGGCAGCAAGATCACATGATGCAGTCAGTGCGGCATGATACAT 2143533 Query 110980 GGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA 111039 ||| || ||||| || || | || || || || ||||||| ||| || Sbjct 2143532 GGTCTCGAAGATCTGAATGTTGAGCTGACGAGCCTCTGGAGAGTCAAATGGCATGCG-CA 2143474 Query 111040 CAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098 | || ||| | || || ||||| || || | || ||||| ||||| ||||| | Sbjct 2143473 GAGCAAGGAATGCGTCAGCCAGACCACTGACTCCAAGGCCGATAGGCCTGTGGCGCATGT 2143414 Query 111099 TAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTT 111158 | ||||| || || | || || || || |||| ||| | ||| || || | Sbjct 2143413 TCGACTTACGAGCCTCCGGCACAGGGTAGTGGTTGATGTCGATGGTTTTGTTGAGGTTCT 2143354 Query 111159 TGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCA- 111217 ||||||| | || || || || || || | | || ||| || || | | | Sbjct 2143353 TGGTAACGACCTGGACGACCTCGTGCAGCTTCTGGAAGTCGAAAC-GCTCGT-TGTGAAG 2143296 Query 111218 -TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 111276 | || || |||| || || || ||||| | ||||| ||||| |||||| | Sbjct 2143295 GTCAACGTAAGTTGGGAGTGCAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGC 2143236 Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 111336 ||||| | || || || || |||||||| || || || || | ||||| || Sbjct 2143235 GCAATACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTG 2143176 Query 111337 GTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 ||| ||||| ||| || |||||||||||||||||||| || || || ||||| || || Sbjct 2143175 GTTGCTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTG 2143116 Query 111397 TGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCT 111455 || | || ||||| | ||| | | || | ||| | ||| | | | || |||| Sbjct 2143115 AGACTCAAGGATAGCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCT 2143057 Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515 | |||| |||| |||||| ||||||||||| || | || | || || | Sbjct 2143056 CGCCCTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGG 2142997 Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575 | || | |||||| | |||| ||| | || ||| || ||||||||||| | Sbjct 2142996 GGCACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGA 2142937 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635 | ||||| ||||| |||| | |||||||| | | ||| ||||||| | || || | Sbjct 2142936 GATCTGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGAT 2142877 Query 111636 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695 | || | || ||||| | | | ||| |||||||||||||| | |||| |||| Sbjct 2142876 TCTTGCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGA 2142817 Query 111696 TAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 111751 | || | || | | || | || | || || || || ||| ||| || || Sbjct 2142816 ATGCACCTGGTCGTTTGTTG-CCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACT 2142758 Query 111752 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTG 111811 || ||||| || | | ||| | || || || || || | || || | | Sbjct 2142757 CGCAGCATAGGGACGAGACCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTA 2142698 Query 111812 GCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCAC 111869 || | | ||| || | || | || ||||| |||||||| | ||||| Sbjct 2142697 GCACGAATGCGATGTGCGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCA- 2142639 Query 111870 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 111929 | | | | || || | ||||| || | || ||||||||| || ||| |||||||| Sbjct 2142638 AGT-CTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGC 2142580 Query 111930 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 111989 | | | ||| | | |||||| ||||| ||||| ||||| | ||||| ||| Sbjct 2142579 ATGATGCGAGCTGTGCTTGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGA 2142520 Query 111990 ACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 112048 | ||| | | |||||| || ||| || || | | ||| |||||||| || || || Sbjct 2142519 A-GTACTTGTTGGACATGAGGTTGTAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGT 2142461 Query 112049 ATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || |||| || || ||||| | ||||| |||||| Sbjct 2142460 ATACCGACAGCCACACGCATAATCATGTGCTGTGG 2142426 >seq12 Length=4887340 Score = 98.7 bits (108), Expect = 1e-15 Identities = 283/432 (66%), Gaps = 10/432 (2%) Strand=Plus/Minus Query 122360 CTAACTTACCATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAA 122419 || |||| | ||||| ||||| |||||||| |||||||| ||||| ||| |||| | Sbjct 3658874 CTGACTTGGCGTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGA 3658815 Query 122420 TGTTTTCCATAAAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTG 122477 |||| ||||| ||||| ||||| || ||||| | | | |||| || || | Sbjct 3658814 TGTTCTCCATGAAGTCGAATGGGTTGACAGCGTTGTAGTACTTGGTGTTGCC--AA---G 3658760 Query 122478 TTTGAGGA---GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCAT 122534 ||| | | || || | || | || ||||| | | |||| || ||||||||| Sbjct 3658759 GGCGAGCAACAGGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCAT 3658700 Query 122535 ACCGATGAGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTC 122594 |||| | ||| ||||| || ||| | |||| ||| ||| || || ||||| Sbjct 3658699 GCCGAGCAATGCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTC 3658640 Query 122595 TTTCACGATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTC 122654 | | |||| |||| || | | || | || || |||||| Sbjct 3658639 GGTGATGATGCTCTGGACGAGCTCCTTGCTTGGCTTGTTCTTCAGGTGAGAGAAGAGAAG 3658580 Query 122655 CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAG 122714 || || || ||| | ||||||||| || || || || || || |||||| || Sbjct 3658579 ACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520 Query 122715 ACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAA 122774 ||||||||||| || |||||||||| |||| | || || ||| || || |||||||| Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460 Query 122775 GATACCCTCCAC 122786 ||||||||| || Sbjct 3658459 GATACCCTCGAC 3658448 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 ||||| ||||| |||||||||| || || ||| | | ||| ||| || |||| ||| Sbjct 2499123 GCATCGATCTCGTCAATGAAGATGATGCAGGGTGTAGACTTGCGTGCGTTTGCAAACAGA 2499182 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749 || || || | | ||| ||||||||||||||||| || || | | |||| ||| Sbjct 2499183 TCCCGTACTCGCGATGGACCAACACCAACAAACATCTCAACGAACTCAGAACCAGA-CAC 2499241 Query 11750 TG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 || || ||| || ||| || || || || | ||| |||||| || ||||| || || Sbjct 2499242 TGAGAAGAACGGAACACCCGACTCTCCTGCTGTTGCTTTGGCGAGCAGAGTCTTACCAGT 2499301 Query 11809 ACCTGGCTTACC-CGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854 || || ||| | | || | ||||||||| |||||||| || ||| Sbjct 2499302 TCCAGGTGGACCACTCAAG-ATGGCGCCTCGAGGGATCTTTGCGCCA 2499347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031890094400