Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq11 183 4e-41 seq12 100 4e-16 >seq11 Length=3629084 Score = 183 bits (202), Expect = 4e-41 Identities = 541/817 (66%), Gaps = 23/817 (3%) Strand=Plus/Minus Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| || || || ||||||||||| || || || ||||| | |||||| || || Sbjct 2143231 TACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 2143172 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| |||||| ||||||||||| ||||||||||| || || ||||| ||||| ||| Sbjct 2143171 CTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGAC 2143112 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933 | || ||||| | ||||| | || | || ||||||| | | || ||||| | Sbjct 2143111 TCAAGGATAGCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCC 2143053 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 ||| |||| |||||| |||||||| || || | | |||| || || || Sbjct 2143052 CTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCA 2142993 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || || ||| || | ||||| ||| | || ||| || |||||||||||||| || Sbjct 2142992 CTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATC 2142933 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 ||| |||||||| || |||||||||| ||| |||| | ||||| | || ||||| Sbjct 2142932 TGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTT 2142873 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG- 119172 || | || | ||| | | | ||| |||||||| || |||| ||| | |||| || Sbjct 2142872 GCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGC 2142813 Query 119173 ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 ||| | | | | || |||||| || || | || ||| ||| || || || | Sbjct 2142812 ACCTGGTCGTTTGTTG-CCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCA 2142754 Query 119230 GCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTC 119289 |||| || | || ||| | ||| ||| || || || | || || | | || | Sbjct 2142753 GCATAGGGACGAGACCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCAC 2142694 Query 119290 TGACATCGTGGATGTGC----ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 || || ||||||| | ||| | || || || |||||||| ||||| Sbjct 2142693 -GA-AT--GCGATGTGCGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAA 2142638 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA- 119404 | |||| || ||||||| || || || ||| |||| | ||| |||||||| Sbjct 2142637 GTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCAT 2142578 Query 119405 GCT-CGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 | | ||| | | || || ||||| |||||| ||||| ||||| | ||||| || Sbjct 2142577 GATGCGAGCTGT---GCTTGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTG 2142521 Query 119463 AACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521 || ||| | | |||||| || ||| || || | | | || |||||| || || || Sbjct 2142520 AA-GTACTTGTTGGACATGAGGTTGTAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATG 2142462 Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558 ||||||| | || ||||||| ||||| || ||| Sbjct 2142461 TATACCGACAGCCACACGCATAATCATGTGCTGTGGT 2142425 >seq12 Length=4887340 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | |||||| ||||| |||||||| || || |||||| || ||||||||||| || Sbjct 3658564 GTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCC 3658505 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||| ||| || || ||| || || || ||||||||||| ||||| || Sbjct 3658504 ACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGC 3658445 Query 130147 CGCGAACGCAAAGAGACG 130164 ||||| || | ||| || Sbjct 3658444 GGCGAAGGCGATGAGTCG 3658427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435091773840