Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq11 183 4e-41
seq12 100 4e-16
>seq11
Length=3629084
Score = 183 bits (202), Expect = 4e-41
Identities = 541/817 (66%), Gaps = 23/817 (3%)
Strand=Plus/Minus
Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814
||||| || || || ||||||||||| || || || ||||| | |||||| || ||
Sbjct 2143231 TACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTG 2143172
Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874
||| |||||| ||||||||||| ||||||||||| || || ||||| ||||| |||
Sbjct 2143171 CTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGAC 2143112
Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933
| || ||||| | ||||| | || | || ||||||| | | || ||||| |
Sbjct 2143111 TCAAGGATAGCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCC 2143053
Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993
||| |||| |||||| |||||||| || || | | |||| || || ||
Sbjct 2143052 CTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCA 2142993
Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053
|| || ||| || | ||||| ||| | || ||| || |||||||||||||| ||
Sbjct 2142992 CTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATC 2142933
Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113
||| |||||||| || |||||||||| ||| |||| | ||||| | || |||||
Sbjct 2142932 TGGTATCCAGAGGGCGTAGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTT 2142873
Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG- 119172
|| | || | ||| | | | ||| |||||||| || |||| ||| | |||| ||
Sbjct 2142872 GCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGC 2142813
Query 119173 ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229
||| | | | | || |||||| || || | || ||| ||| || || || |
Sbjct 2142812 ACCTGGTCGTTTGTTG-CCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCA 2142754
Query 119230 GCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTC 119289
|||| || | || ||| | ||| ||| || || || | || || | | || |
Sbjct 2142753 GCATAGGGACGAGACCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCAC 2142694
Query 119290 TGACATCGTGGATGTGC----ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345
|| || ||||||| | ||| | || || || |||||||| |||||
Sbjct 2142693 -GA-AT--GCGATGTGCGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAA 2142638
Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA- 119404
| |||| || ||||||| || || || ||| |||| | ||| ||||||||
Sbjct 2142637 GTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCAT 2142578
Query 119405 GCT-CGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462
| | ||| | | || || ||||| |||||| ||||| ||||| | ||||| ||
Sbjct 2142577 GATGCGAGCTGT---GCTTGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTG 2142521
Query 119463 AACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521
|| ||| | | |||||| || ||| || || | | | || |||||| || || ||
Sbjct 2142520 AA-GTACTTGTTGGACATGAGGTTGTAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATG 2142462
Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558
||||||| | || ||||||| ||||| || |||
Sbjct 2142461 TATACCGACAGCCACACGCATAATCATGTGCTGTGGT 2142425
>seq12
Length=4887340
Score = 100 bits (110), Expect = 4e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| | |||||| ||||| |||||||| || || |||||| || ||||||||||| ||
Sbjct 3658564 GTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCC 3658505
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||||| ||| || || ||| || || || ||||||||||| ||||| ||
Sbjct 3658504 ACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGC 3658445
Query 130147 CGCGAACGCAAAGAGACG 130164
||||| || | ||| ||
Sbjct 3658444 GGCGAAGGCGATGAGTCG 3658427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435091773840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |