Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq11 230 3e-55 seq12 129 7e-25 >seq11 Length=3629084 Score = 230 bits (254), Expect = 3e-55 Identities = 909/1398 (65%), Gaps = 39/1398 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| ||||| ||||||| ||||| || |||||||| ||| | Sbjct 2142426 CCACAGCACATGATTATGCGTGTGGCTGTCGGTATACATGGAGAGGACATTGAGGCTGCC 2142485 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || ||| || |||||| | | ||| |||| ||||| | ||||| ||||| Sbjct 2142486 ATCGAAACTTACAACCTCATGTCCAACAAGTAC-TTCACACACGCCTCGCCAACGCTCTT 2142544 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||| |||||| | | || | | ||||||||| ||| || |||||||| Sbjct 2142545 TGCCGCTGGCACACCACAAGCACAGCTCGCATCATGCTTCCTTGTCGACATGAAGGAGGA 2142604 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCT 104458 | || | || ||||| | || || | | | | ||||| | |||||||| ||| Sbjct 2142605 CAGCATTGAGGGCATCTACGACACGCTCAAG-ACT-TGCGCTATGATCTCAAAAAATGCT 2142662 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || || | || | || ||| | | || | | || || | || || Sbjct 2142663 GGTGGCGTCGGTCTCAACGCACATCGCATTCGTGCTAGTGGTTCATACATCAGTGGCACC 2142722 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || || | ||| | | || ||||| || || || ||| ||| || || || Sbjct 2142723 AACGGCACGTCCAACGGTCTCGTCCCTATGCTGCGAGTGTTCAACAACACCGCCCGATAC 2142782 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | || | || | | || | || | |||| |||| | ||||||||||| Sbjct 2142783 GTTGACCAGGGCGG-CAACAAACGACCAGGTGCATTCGCCATCTACTTGGAGCCATGGCA 2142841 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGG 104692 ||| ||| | | | ||||| || | || || || || | || |||| |||| Sbjct 2142842 CGCCGATGTGTTTGCCTTCCTCGACCTCCGCAAGAATCACGGCAAGGAAGAGGTTCGCGC 2142901 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 | ||||||||||||| ||| |||||||| |||||||||||||||||| | || ||| Sbjct 2142902 T--CGCGATCTCTTCTACGCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCC 2142959 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| ||||| | |||||| | || || || || | |||| | || Sbjct 2142960 AACGGCGAGTGGACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGA 2143019 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 ||||||||||| || ||| |||| |||| || ||||| | || ||| ||| Sbjct 2143020 GAGGAGTTTGAGAAGCTCTACGAGCAGTATGAGGGCGAGGGTCGTGGTCGTGAGACTGTG 2143079 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | || | | ||| | ||||| || ||||||||||||||||||| || ||||| Sbjct 2143080 CGCGC-CCAGAAGCTCTGGTACGCTATCCTTGAGTCTCAAACCGAGACTGGCACCCCATA 2143138 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || || ||||||| ||||| || || ||||| | || ||| Sbjct 2143139 CATGCTCTACAAGGATGCTTGTAACCGCAAGAGCAACCAGAAGAACCTTGGCACTATCCG 2143198 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| | || || || ||| | || | || | || |||||| ||||| | Sbjct 2143199 CAGCTCCAACTTGTGCACCGAGATCATCGAGTATTGCGCAC-CCGATGAGGTTGCTGTCT 2143257 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CATTT-GA 105108 | ||||| ||||| || || ||||| | || || || | |||| || | ||| || Sbjct 2143258 GCAACCTTGCATCTATTGCACTCCCAACTTACGTTGA--CCTTCACAACGAGCGTTTCGA 2143315 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | | || || ||||| || | || ||||| ||||| |||| | || || Sbjct 2143316 CTTCCAGAAGCTGCACGAGGTCGTCCAGGTCGTTACCAAGAACCTCAACAAAACCATCGA 2143375 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 | || ||||| || | |||||||| || || ||| | ||| | || || || Sbjct 2143376 CATCAACCACTACCCTGTGCCGGAGGCTCGTAAGTCGAACATGCGCCACAGGCCTATCGG 2143435 Query 105229 TCTCGGTGTTCAG-GGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCC 105286 || || | |||| ||||| || || | |||| || || || ||| ||||||| || Sbjct 2143436 CCTTGGAG-TCAGTGGTCTGGCTGACGCATTCCTTGCTCTG-CGCATGCCATTTGACTCT 2143493 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 || || | |||| | || || |||||||||||||| ||||| || Sbjct 2143494 CCAGAGGCTCGTCAGCTCAACATTCAGATCTTCGAGACCATGTATCATGCCGCACTGACT 2143553 Query 105347 GCGAGTTCAGAGTTGGCAG--AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 || | || | || | | | | |||| | || || || | || || ||||||| Sbjct 2143554 GCATCATGTGATCTTGCTGCCAAGCT--TGGTACGTACGAGACATACGAAGGCTCTCCAG 2143611 Query 105405 CTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA---GACCAAGCTTCACTAC 105460 || |||||| | ||| || | || |||| |||| || | | ||| ||| | Sbjct 2143612 TGTC-CAAGGGCGAGCTCCAGTACGACATGT-GGAATGTCACTCCATCAAACTT--GTGG 2143667 Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 |||||||| || ||||||| ||| | | ||| | || ||| ||| |||||| Sbjct 2143668 GACTGGGATGCACTCAAGGCTAAGATCGCACAACACGGTGTACGAAACTCTCTGCTCATG 2143727 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 || ||||||||||| ||||| ||| || ||| |||| || || ||||| || || Sbjct 2143728 GCACCAATGCCAACTGCCTCGACCAGTCAGATCATGGGCTTCAACGAGTGCTTCGAGCCA 2143787 Query 105581 TACACGACGAACATCTAT 105598 ||||| | ||||| ||| Sbjct 2143788 TACACTTCCAACATTTAT 2143805 >seq12 Length=4887340 Score = 129 bits (142), Expect = 7e-25 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 94866 |||||| |||| || || || ||||||||||||||||| || |||||| || || Sbjct 3658427 CGACTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATC 3658486 Query 94867 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 94926 | |||||| |||||||| || ||||||||||| ||| ||||||||||||||| |||||| Sbjct 3658487 TTTTGGCTGAAGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCT 3658546 Query 94927 CGTGACGAGGG 94937 ||||| ||||| Sbjct 3658547 CGTGATGAGGG 3658557 Score = 113 bits (124), Expect = 5e-20 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 |||||| | ||||| ||||| |||||||||| |||||| ||| | | ||| ||| Sbjct 2499113 CTTTCCAATAGCATCGATCTCGTCAATGAAGATGATGCAGGGTGTAGACTTGCGTGCGTT 2499172 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813 | |||| ||||||||||| ||| | || ||||||||||||||||| || || | | Sbjct 2499173 TGCAAACAGATCCCGTACTCGCGATGGACCAACACCAACAAACATCTCAACGAACTCAGA 2499232 Query 9814 GGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872 | | ||| || || ||| || ||| || || || || | ||| |||||| |||| Sbjct 2499233 ACCAG-ACACTGAGAAGAACGGAACACCCGACTCTCCTGCTGTTGCTTTGGCGAGCAGAG 2499291 Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 ||||||| || || || ||| | || ||| ||||| || ||||| |||||| Sbjct 2499292 TCTTACCAGTTCCAGGTGGACCACTCAAGATGGCGCCTCGAGGGATCTTTGCGCCA 2499347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260697929360