Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4 203 1e-46 seq6 145 2e-29 seq5 89.7 2e-12 >seq4 Length=2770911 Score = 203 bits (224), Expect = 1e-46 Identities = 926/1452 (64%), Gaps = 20/1452 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || ||||| || || || || || | | | | | |||| || Sbjct 1144380 GCCATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTACCGCGATGACCGA 1144439 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| |||||||| || || || ||| |||| || || || | ||| || || || Sbjct 1144440 ATCGAAATCATTGCAAACGACCAGGGAAACCGAACGACACCTTCCTTCGTCGCCTTCACA 1144499 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||||||| | || || ||| |||| || || |||| || || |||| || Sbjct 1144500 GACACTGAGCGTCTTATCGGAGATGCTGCCAAGAACCAAGTCGCCATGAACCCAATCAAC 1144559 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || ||||| ||||| || ||||| | | || | ||| || | Sbjct 1144560 ACTGTCTTCGATGCAAAGCGCCTCATTGGCCGCAAGTTCGCAGACGCTGAGGTGCAGGCC 1144619 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || || || || | || | | | ||| | || ||| ||| ||||| || Sbjct 1144620 GACATGAAGCACTTCCCATTCAAGGTCAT-CGACAAGGC--TGCTAAGCCAGTTATTCAG 1144676 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 ||||| | || || || || | || ||| || || || || || ||||| | Sbjct 1144677 GTTGAGTTCAAGGGCGAGACCAAGGAGTTCACACCAGAGGAGATCTCCTCGATGGTCCTC 1144736 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | || || |||| | || | ||||| | | ||||| | Sbjct 1144737 ACAAAGATGCGAGAGACAGCAGAGTCATACCTGGGAGGCACAGTTAACAACGCTGTCGTC 1144796 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||||||||| || || || || | ||||| || || || || || || |||| Sbjct 1144797 ACTGTACCAGCATACTTCAACGACTCTCAGCGACAAGCCACTAAGGACGCAGGTCTCATT 1144856 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || | || || || || || |||||||| || ||||| || || Sbjct 1144857 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCAACTGCTGCTGCCATTGCCTACGGC 1144916 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || || | || ||| || || |||| || || || || ||||| ||||| Sbjct 1144917 CTCGACAAGAAGACTGAGGGCGAGCGTAACGTTCTGATCTTCGACTTGGGTGGAGGTACC 1144976 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || || || | || ||||| || || || || || | |||||||| Sbjct 1144977 TTCGATGTCTCTCTTCTCACCATCGAGGAGGGCATCTTCGAGGTCAAGTCTACTGCTGGA 1145036 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || || ||||| || || || || || | || || || || ||||| || Sbjct 1145037 GACACTCACCTGGGTGGTGAGGACTTCGACAACAGACTGGTCAACCACTTCGTTAACGAG 1145096 Query 349919 TTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATC-CTAGAGCAATGCGTCGCCTAA 349976 || || || ||||| || | ||| ||| | || | | |||| | || || || Sbjct 1145097 TTCAAACG-CAAGCACAAGAAAGAT-TTGACTACAAACGCACGAGCTCTTCGACGTCTCC 1145154 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 ||||||| ||||| ||||| |||||| | | || || || | || || || || || | Sbjct 1145155 GAACTGCCTGTGAGCGTGCCAAGCGTACGCTCTCTTCGTCTGCACAGACATCCATCGAGA 1145214 Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096 | || ||||| || || || |||| | ||||| || ||||| || || || | Sbjct 1145215 TCGACTCTCTCTTCGAAGGTGTCGACTTCTACACCTCTATCACTCGTGCCCGATTCGAGG 1145274 Query 350097 AATTATGTATGGATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 | || || |||||| || | ||| || ||||| || || || | || Sbjct 1145275 AGTTGTGCCAGGATCTCTTCCGCAGC-ACCATGGAGCCAGTTGAGCGCACCCTTCGCGAC 1145333 Query 350156 GCAAAAAT-GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 || || || | | | ||| | | | || | || | || || |||||||| ||||| Sbjct 1145334 GCCAAGATCGACAAGTCATCTG-TCCACGAGATCGTCCTTGTCGGAGGTTCTACCCGTAT 1145392 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAAT 350274 ||||| | || || | | || || || || || ||||| || || | || || Sbjct 1145393 CCCAAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAGCCAAACAAGTCCAT 1145452 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 || || || || |||||||| |||||||| || || ||||| | ||| | ||||| | Sbjct 1145453 CAACCCTGACGAGGCTGTTGCCTATGGTGCAGCCGTCCAGGCCGCCATTCTCTCTGGTGA 1145512 Query 350335 -----TAAG-AGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388 ||| | || | | || |||| | || || || || |||| | || || Sbjct 1145513 CACCTCAAGCAAGTCCACCAACGA-GATC--CTCCTGCTTGACGTCGCTCCTTTGTCTCT 1145569 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 || | || ||| | || | ||| ||||||| | || || || | ||| | || Sbjct 1145570 CGGTATTGAGACTGCAGGAGGAGTGATGACTGCCTTGATCAAGAGGAACACTACCATTCC 1145629 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 ||| || |||||| | ||| || || || || |||||||| | || ||||| Sbjct 1145630 TACGAAGAAGTCCGAGGTTTTCTCGACCTTCAGCGACAATCAGCCTGGTGTGCTCATTCA 1145689 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 || || ||||| |||||||| | || || || || || | || |||| || Sbjct 1145690 GGTGTTCGAAGGAGAACGTGCCAGAACCAAGGACAACAACCTTATGGGCAAATTCGAGCT 1145749 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 | || || |||||| || | || || || |||||||| || | |||||| |||| Sbjct 1145750 CACTGGCATCCCACCAGCCCCACGCGGGGTACCCCAGATTGAGGTTACCTTCGATCTTGA 1145809 Query 350629 TTCAAATGGTAT 350640 | ||||| || Sbjct 1145810 CGCCAATGGAAT 1145821 >seq6 Length=1630888 Score = 145 bits (160), Expect = 2e-29 Identities = 167/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 |||||||| || | ||| || ||||||||||| || ||||| || || || || || || Sbjct 190440 ATACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCT 190499 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || ||||| |||||||| ||||||||||| || || Sbjct 190500 GAGAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGT 190559 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || |||||||||||||| || ||| || ||||| || || | ||| || | || Sbjct 190560 GGAATGCCCTCTTTATCCTGAATCTT-GCTCTTCACATTGTCGATAGTATCGGAGGACTC 190618 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 ||| || || || | ||||| || || || || || || || Sbjct 190619 AACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660 >seq5 Length=971886 Score = 89.7 bits (98), Expect = 2e-12 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 378201 ATCTTCTAATGCT-TTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTG 378259 |||||| || ||| || || ||||| || || |||||||| || | | ||| || || | Sbjct 608413 ATCTTCCAA-GCTCTTCATCAGTCGCCGTGACATATAACCCGTCTCAGCAGTCTTGACAG 608471 Query 378260 CAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAA 378319 ||||||| | || ||| |||||||| ||| || ||||||| |||||||||||| ||| Sbjct 608472 CAGTATCGACTAGACCTTCACGACCAGACATGGCGTGGAAGATGAATTCAGTAGGATTAA 608531 Query 378320 GTCCAC 378325 | |||| Sbjct 608532 GACCAC 608537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254128201242