Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4 203 1e-46
seq6 145 2e-29
seq5 89.7 2e-12
>seq4
Length=2770911
Score = 203 bits (224), Expect = 1e-46
Identities = 926/1452 (64%), Gaps = 20/1452 (1%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || ||||| || ||||| || || || || || | | | | | |||| ||
Sbjct 1144380 GCCATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTACCGCGATGACCGA 1144439
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| ||||| |||||||| || || || ||| |||| || || || | ||| || || ||
Sbjct 1144440 ATCGAAATCATTGCAAACGACCAGGGAAACCGAACGACACCTTCCTTCGTCGCCTTCACA 1144499
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| ||||||||| | || || ||| |||| || || |||| || || |||| ||
Sbjct 1144500 GACACTGAGCGTCTTATCGGAGATGCTGCCAAGAACCAAGTCGCCATGAACCCAATCAAC 1144559
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || || ||||| ||||| || ||||| | | || | ||| || |
Sbjct 1144560 ACTGTCTTCGATGCAAAGCGCCTCATTGGCCGCAAGTTCGCAGACGCTGAGGTGCAGGCC 1144619
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
|| | || || || || || | || | | | ||| | || ||| ||| ||||| ||
Sbjct 1144620 GACATGAAGCACTTCCCATTCAAGGTCAT-CGACAAGGC--TGCTAAGCCAGTTATTCAG 1144676
Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558
||||| | || || || || | || ||| || || || || || ||||| |
Sbjct 1144677 GTTGAGTTCAAGGGCGAGACCAAGGAGTTCACACCAGAGGAGATCTCCTCGATGGTCCTC 1144736
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
|| ||| || | || || |||| | || | ||||| | | ||||| |
Sbjct 1144737 ACAAAGATGCGAGAGACAGCAGAGTCATACCTGGGAGGCACAGTTAACAACGCTGTCGTC 1144796
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
||||||||||| || || || || | ||||| || || || || || || ||||
Sbjct 1144797 ACTGTACCAGCATACTTCAACGACTCTCAGCGACAAGCCACTAAGGACGCAGGTCTCATT 1144856
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | || || || | || || || || || |||||||| || ||||| || ||
Sbjct 1144857 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCAACTGCTGCTGCCATTGCCTACGGC 1144916
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
|| || || | || ||| || || |||| || || || || ||||| |||||
Sbjct 1144917 CTCGACAAGAAGACTGAGGGCGAGCGTAACGTTCTGATCTTCGACTTGGGTGGAGGTACC 1144976
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|| ||||| || || || || | || ||||| || || || || || | ||||||||
Sbjct 1144977 TTCGATGTCTCTCTTCTCACCATCGAGGAGGGCATCTTCGAGGTCAAGTCTACTGCTGGA 1145036
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || || || ||||| || || || || || | || || || || ||||| ||
Sbjct 1145037 GACACTCACCTGGGTGGTGAGGACTTCGACAACAGACTGGTCAACCACTTCGTTAACGAG 1145096
Query 349919 TTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATC-CTAGAGCAATGCGTCGCCTAA 349976
|| || || ||||| || | ||| ||| | || | | |||| | || || ||
Sbjct 1145097 TTCAAACG-CAAGCACAAGAAAGAT-TTGACTACAAACGCACGAGCTCTTCGACGTCTCC 1145154
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036
||||||| ||||| ||||| |||||| | | || || || | || || || || || |
Sbjct 1145155 GAACTGCCTGTGAGCGTGCCAAGCGTACGCTCTCTTCGTCTGCACAGACATCCATCGAGA 1145214
Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096
| || ||||| || || || |||| | ||||| || ||||| || || || |
Sbjct 1145215 TCGACTCTCTCTTCGAAGGTGTCGACTTCTACACCTCTATCACTCGTGCCCGATTCGAGG 1145274
Query 350097 AATTATGTATGGATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155
| || || |||||| || | ||| || ||||| || || || | ||
Sbjct 1145275 AGTTGTGCCAGGATCTCTTCCGCAGC-ACCATGGAGCCAGTTGAGCGCACCCTTCGCGAC 1145333
Query 350156 GCAAAAAT-GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214
|| || || | | | ||| | | | || | || | || || |||||||| |||||
Sbjct 1145334 GCCAAGATCGACAAGTCATCTG-TCCACGAGATCGTCCTTGTCGGAGGTTCTACCCGTAT 1145392
Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAAT 350274
||||| | || || | | || || || || || ||||| || || | || ||
Sbjct 1145393 CCCAAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAGCCAAACAAGTCCAT 1145452
Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334
|| || || || |||||||| |||||||| || || ||||| | ||| | ||||| |
Sbjct 1145453 CAACCCTGACGAGGCTGTTGCCTATGGTGCAGCCGTCCAGGCCGCCATTCTCTCTGGTGA 1145512
Query 350335 -----TAAG-AGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388
||| | || | | || |||| | || || || || |||| | || ||
Sbjct 1145513 CACCTCAAGCAAGTCCACCAACGA-GATC--CTCCTGCTTGACGTCGCTCCTTTGTCTCT 1145569
Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448
|| | || ||| | || | ||| ||||||| | || || || | ||| | ||
Sbjct 1145570 CGGTATTGAGACTGCAGGAGGAGTGATGACTGCCTTGATCAAGAGGAACACTACCATTCC 1145629
Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508
||| || |||||| | ||| || || || || |||||||| | || |||||
Sbjct 1145630 TACGAAGAAGTCCGAGGTTTTCTCGACCTTCAGCGACAATCAGCCTGGTGTGCTCATTCA 1145689
Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568
|| || ||||| |||||||| | || || || || || | || |||| ||
Sbjct 1145690 GGTGTTCGAAGGAGAACGTGCCAGAACCAAGGACAACAACCTTATGGGCAAATTCGAGCT 1145749
Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628
| || || |||||| || | || || || |||||||| || | |||||| ||||
Sbjct 1145750 CACTGGCATCCCACCAGCCCCACGCGGGGTACCCCAGATTGAGGTTACCTTCGATCTTGA 1145809
Query 350629 TTCAAATGGTAT 350640
| ||||| ||
Sbjct 1145810 CGCCAATGGAAT 1145821
>seq6
Length=1630888
Score = 145 bits (160), Expect = 2e-29
Identities = 167/222 (75%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
|||||||| || | ||| || ||||||||||| || ||||| || || || || || ||
Sbjct 190440 ATACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCT 190499
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| || || || ||||| |||||||| ||||||||||| || ||
Sbjct 190500 GAGAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGT 190559
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || |||||||||||||| || ||| || ||||| || || | ||| || | ||
Sbjct 190560 GGAATGCCCTCTTTATCCTGAATCTT-GCTCTTCACATTGTCGATAGTATCGGAGGACTC 190618
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728
||| || || || | ||||| || || || || || || ||
Sbjct 190619 AACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660
>seq5
Length=971886
Score = 89.7 bits (98), Expect = 2e-12
Identities = 97/126 (77%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 378201 ATCTTCTAATGCT-TTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTG 378259
|||||| || ||| || || ||||| || || |||||||| || | | ||| || || |
Sbjct 608413 ATCTTCCAA-GCTCTTCATCAGTCGCCGTGACATATAACCCGTCTCAGCAGTCTTGACAG 608471
Query 378260 CAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAA 378319
||||||| | || ||| |||||||| ||| || ||||||| |||||||||||| |||
Sbjct 608472 CAGTATCGACTAGACCTTCACGACCAGACATGGCGTGGAAGATGAATTCAGTAGGATTAA 608531
Query 378320 GTCCAC 378325
| ||||
Sbjct 608532 GACCAC 608537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254128201242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |