Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq11 197 2e-45 >seq11 Length=3629084 Score = 197 bits (218), Expect = 2e-45 Identities = 379/546 (69%), Gaps = 12/546 (2%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| || | ||| | | |||||||| || |||||| ||||||| || || | Sbjct 2142489 GAAACTTACAACCTCATGTCCAACAAGTACTTCACACACGCCTCGCCAACGCTCTTTGCC 2142548 Query 53303 GCTGGTACGAATCACCCTCAGATGTCG-AGC-TGCTTCCTGGTGGCGATGAAGGATGACT 53360 ||||| || | ||| || | ||| | | |||||||| || | |||||||| ||| Sbjct 2142549 GCTGGCAC--ACCACAAGCACAGCTCGCATCATGCTTCCTTGTCGACATGAAGGAGGACA 2142606 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || ||||||||||| ||||||||| || || ||||| || | |||| Sbjct 2142607 GCATTGAGGGCATCTACGACACGCTCAAGACTTGCGCTATGATCTCAAAAAATGCTGGTG 2142666 Query 53421 GTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 | ||||| || || || | | || | ||||| | || || |||| || || || Sbjct 2142667 GCGTCGGTCTCAAC-GCAC-ATCGCATTCGTGCTAGTGGTTCATACATCAGTGGCACCAA 2142724 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 |||| || | || |||| |||||||| || || ||||||||||| ||||| ||||| Sbjct 2142725 CGGCACGTCCAACGGTCTCGTCCCTATGCTGCGAGTGTTCAACAACACCGCCCGATACGT 2142784 Query 53539 CAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 ||||||| || || || | ||| | | |||||||||||| | ||||| ||||||| Sbjct 2142785 TGACCAGGGCGGCAACAAACGACCAGGTG-CATTCGCCATCTACTTGGAGCCATGGCACG 2142843 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 |||| | | | || ||||| || || |||||| || | |||||| | ||| | Sbjct 2142844 CCGATGTGTTTGCCTTCCTCGACCTCCGCAAGAATCACGGCAAGGAAGAGGTTCGCGCTC 2142903 Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 | || || || ||| || || ||||| || || ||||||||| | || ||| || Sbjct 2142904 GCGATCTCTTCTAC-GCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCCAAC 2142962 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 | |||||| || ||||| || || |||||||||||||| | |||||| || ||| Sbjct 2142963 GGCGAGTGGACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGAGAG 2143022 Query 53777 GAGTTT 53782 |||||| Sbjct 2143023 GAGTTT 2143028 Score = 122 bits (134), Expect = 1e-22 Identities = 303/452 (67%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| || ||||| ||||| || || ||||||||||| |||||||| || | |||| Sbjct 1511315 CCAGTACCAATACCATCTGCGCCGTTGATCAGAATCATAGGCACGACTGGCAAGTAGTGT 1511256 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | || || || ||| ||| |||| || | ||| || | Sbjct 1511255 TCTGGCTCGATCGTCTTGCCATCATCAGTGTTGTAGGACAGCAGTGCTTCGTCTGTCTGG 1511196 Query 117272 TCGAATAT-GTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330 | ||| || |||| | | || | ||||| ||| | ||||| |||| || || | Sbjct 1511195 TGGAAGATACGTCTT-GCGAAGGGCGAGAGGCGTGTGTAGATGTATCGAGGACTGGCTGA 1511137 Query 117331 ATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 |||| |||||| ||||| | || || | |||||| ||||| | | ||| | ||| Sbjct 1511136 ATCCGCGCCACCTTGGAGACGAGAGCCAAAGTTTCCACTTGGCTCTAGGCAGTTGATGTT 1511077 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450 ||||| || || ||||| || || | | ||| || || ||| || | |||||| Sbjct 1511076 GTTGGACCCGACGAAGTTCTGTGCGAGGCCGACGATAGTCTGTTGCAGAGAAGTCTCACC 1511017 Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAG-CCACCTTCATGTCTG 117509 || |||| || ||| ||| | ||| |||||| ||| ||| | ||||| | ||| Sbjct 1511016 ATATGGATAGGCGGTCATCTCAGAGACGGCGCCCGCGAGC-GAGACGACCTTTAGGTCCT 1510958 Query 117510 ACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCAT 117569 | | | || ||||| ||||| || | ||||| || || | |||||| | ||||| Sbjct 1510957 TCTTGACATTACGCTTGAAGCAGGTGTAGAGGACCTTTCGTTGGCCTGGCTTGAAACCAT 1510898 Query 117570 CCGCCACGTGA-GGGATCGAACGCTTGATGTC 117600 | ||| ||| || || ||||||| | |||| Sbjct 1510897 CGATCAC-TGATGGAATGGAACGCTGGTTGTC 1510867 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 55482 TACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCA 55541 |||| ||||| |||||| |||| ||||||||||| || ||||| ||||||||||||| Sbjct 2143708 TACGAAACTCTCTGCTCATGGCACCAATGCCAACTGCCTCGACCAGTCAGATCATGGGCT 2143767 Query 55542 ACAACGAGGCGTTCGAGCCGTACACGACCAACATCTA 55578 ||||||| |||||||| ||||| ||||||| || Sbjct 2143768 TCAACGAGTGCTTCGAGCCATACACTTCCAACATTTA 2143804 Score = 89.7 bits (98), Expect = 6e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816 ||| || || | ||||| || ||||||||||||||| || || || ||||| ||||| Sbjct 1510431 CACTTGCAAGAAGTTGATGAGCAAGCCCTTGATGTGAGAACCATCGTGATCCTGATCGGT 1510372 Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGAC-CTTTC-CATGT 152874 ||||||||| ||| |||| || || | || | | ||| | || || ||||| || Sbjct 1510371 CATGATCATGAGATGACCATATCG-AAGTGATTTGGTG-TCTGTGTACTCTTTCTTGTGC 1510314 Query 152875 TGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACC 152934 || || || | || ||| |||| ||| || ||||| || | || | ||| | | Sbjct 1510313 TGCAGACCCATGAACTTCTTGATGTTCTGAATCTCCTCGTTCTTGGATATCTGGTCGATT 1510254 Query 152935 GTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAA 152984 || ||||| ||||| ||| || |||| || || || || || || ||||| Sbjct 1510253 GTCGCATCACGAACGTTGAGCAGCTTACCGCGAAGAGGGAATACACCGAA 1510204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215904237200