Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq11 197 2e-45
>seq11
Length=3629084
Score = 197 bits (218), Expect = 2e-45
Identities = 379/546 (69%), Gaps = 12/546 (2%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
|| || ||| || | ||| | | |||||||| || |||||| ||||||| || || |
Sbjct 2142489 GAAACTTACAACCTCATGTCCAACAAGTACTTCACACACGCCTCGCCAACGCTCTTTGCC 2142548
Query 53303 GCTGGTACGAATCACCCTCAGATGTCG-AGC-TGCTTCCTGGTGGCGATGAAGGATGACT 53360
||||| || | ||| || | ||| | | |||||||| || | |||||||| |||
Sbjct 2142549 GCTGGCAC--ACCACAAGCACAGCTCGCATCATGCTTCCTTGTCGACATGAAGGAGGACA 2142606
Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420
|| || ||||||||||| ||||||||| || || ||||| || | ||||
Sbjct 2142607 GCATTGAGGGCATCTACGACACGCTCAAGACTTGCGCTATGATCTCAAAAAATGCTGGTG 2142666
Query 53421 GTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478
| ||||| || || || | | || | ||||| | || || |||| || || ||
Sbjct 2142667 GCGTCGGTCTCAAC-GCAC-ATCGCATTCGTGCTAGTGGTTCATACATCAGTGGCACCAA 2142724
Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538
|||| || | || |||| |||||||| || || ||||||||||| ||||| |||||
Sbjct 2142725 CGGCACGTCCAACGGTCTCGTCCCTATGCTGCGAGTGTTCAACAACACCGCCCGATACGT 2142784
Query 53539 CAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597
||||||| || || || | ||| | | |||||||||||| | ||||| |||||||
Sbjct 2142785 TGACCAGGGCGGCAACAAACGACCAGGTG-CATTCGCCATCTACTTGGAGCCATGGCACG 2142843
Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657
|||| | | | || ||||| || || |||||| || | |||||| | ||| |
Sbjct 2142844 CCGATGTGTTTGCCTTCCTCGACCTCCGCAAGAATCACGGCAAGGAAGAGGTTCGCGCTC 2142903
Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716
| || || || ||| || || ||||| || || ||||||||| | || ||| ||
Sbjct 2142904 GCGATCTCTTCTAC-GCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCCAAC 2142962
Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776
| |||||| || ||||| || || |||||||||||||| | |||||| || |||
Sbjct 2142963 GGCGAGTGGACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGAGAG 2143022
Query 53777 GAGTTT 53782
||||||
Sbjct 2143023 GAGTTT 2143028
Score = 122 bits (134), Expect = 1e-22
Identities = 303/452 (67%), Gaps = 6/452 (1%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
||||| || ||||| ||||| || || ||||||||||| |||||||| || | ||||
Sbjct 1511315 CCAGTACCAATACCATCTGCGCCGTTGATCAGAATCATAGGCACGACTGGCAAGTAGTGT 1511256
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| ||||| | | | || || || ||| ||| |||| || | ||| || |
Sbjct 1511255 TCTGGCTCGATCGTCTTGCCATCATCAGTGTTGTAGGACAGCAGTGCTTCGTCTGTCTGG 1511196
Query 117272 TCGAATAT-GTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330
| ||| || |||| | | || | ||||| ||| | ||||| |||| || || |
Sbjct 1511195 TGGAAGATACGTCTT-GCGAAGGGCGAGAGGCGTGTGTAGATGTATCGAGGACTGGCTGA 1511137
Query 117331 ATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390
|||| |||||| ||||| | || || | |||||| ||||| | | ||| | |||
Sbjct 1511136 ATCCGCGCCACCTTGGAGACGAGAGCCAAAGTTTCCACTTGGCTCTAGGCAGTTGATGTT 1511077
Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450
||||| || || ||||| || || | | ||| || || ||| || | ||||||
Sbjct 1511076 GTTGGACCCGACGAAGTTCTGTGCGAGGCCGACGATAGTCTGTTGCAGAGAAGTCTCACC 1511017
Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAG-CCACCTTCATGTCTG 117509
|| |||| || ||| ||| | ||| |||||| ||| ||| | ||||| | |||
Sbjct 1511016 ATATGGATAGGCGGTCATCTCAGAGACGGCGCCCGCGAGC-GAGACGACCTTTAGGTCCT 1510958
Query 117510 ACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCAT 117569
| | | || ||||| ||||| || | ||||| || || | |||||| | |||||
Sbjct 1510957 TCTTGACATTACGCTTGAAGCAGGTGTAGAGGACCTTTCGTTGGCCTGGCTTGAAACCAT 1510898
Query 117570 CCGCCACGTGA-GGGATCGAACGCTTGATGTC 117600
| ||| ||| || || ||||||| | ||||
Sbjct 1510897 CGATCAC-TGATGGAATGGAACGCTGGTTGTC 1510867
Score = 95.1 bits (104), Expect = 1e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 55482 TACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCA 55541
|||| ||||| |||||| |||| ||||||||||| || ||||| |||||||||||||
Sbjct 2143708 TACGAAACTCTCTGCTCATGGCACCAATGCCAACTGCCTCGACCAGTCAGATCATGGGCT 2143767
Query 55542 ACAACGAGGCGTTCGAGCCGTACACGACCAACATCTA 55578
||||||| |||||||| ||||| ||||||| ||
Sbjct 2143768 TCAACGAGTGCTTCGAGCCATACACTTCCAACATTTA 2143804
Score = 89.7 bits (98), Expect = 6e-13
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816
||| || || | ||||| || ||||||||||||||| || || || ||||| |||||
Sbjct 1510431 CACTTGCAAGAAGTTGATGAGCAAGCCCTTGATGTGAGAACCATCGTGATCCTGATCGGT 1510372
Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGAC-CTTTC-CATGT 152874
||||||||| ||| |||| || || | || | | ||| | || || ||||| ||
Sbjct 1510371 CATGATCATGAGATGACCATATCG-AAGTGATTTGGTG-TCTGTGTACTCTTTCTTGTGC 1510314
Query 152875 TGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACC 152934
|| || || | || ||| |||| ||| || ||||| || | || | ||| | |
Sbjct 1510313 TGCAGACCCATGAACTTCTTGATGTTCTGAATCTCCTCGTTCTTGGATATCTGGTCGATT 1510254
Query 152935 GTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAA 152984
|| ||||| ||||| ||| || |||| || || || || || || |||||
Sbjct 1510253 GTCGCATCACGAACGTTGAGCAGCTTACCGCGAAGAGGGAATACACCGAA 1510204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215904237200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |