Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq11 208 9e-49 seq13 188 8e-43 seq6 156 5e-33 seq12 136 5e-27 >seq11 Length=3629084 Score = 208 bits (230), Expect = 9e-49 Identities = 799/1233 (65%), Gaps = 39/1233 (3%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 ||||||||||| ||| | ||||| ||| | ||||| || || | |||||||||| Sbjct 2143643 CCACATGTCGTACTGGAGCTCGCCCTTGGACACTGGAGAGCCTTCGTATGTCTCGTACGT 2143584 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 || | | || || ||||| || | | || || || ||||| ||| ||| || Sbjct 2143583 ACCAAGCTTGGCAGCAAGATCACATGATGCAGTCAGTGCGGCATGATACATGGTCTCGAA 2143524 Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720 || |||| | || |||| ||| ||| || | || || || | ||| Sbjct 2143523 GATCTGAATGTTGAGCTGACGAGCCTCTGGAGAGTCAAATGGCATGCGCAGAGCAAGGAA 2143464 Query 80721 CACGTCAGCCAGGCC-CTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCT 80779 |||||||||| || |||| | || | | |||| || | ||||||| ||||||| | Sbjct 2143463 TGCGTCAGCCAGACCACTGA-CTCCAAGGCCGATAGGCCTGTGGCGCATGTTCGA-CTTA 2143406 Query 80780 CG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 || |||||||| | ||||| ||| | |||||| ||| ||||| ||||| Sbjct 2143405 CGAGCCTCCGGCACAGGGTAGTGGTTGATGTCGATGGTTTTGTTGAGGTTCTTGGTAACG 2143346 Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCA---CAA---AT 80892 ||| | || || || || ||||| |||||||| | | | | ||| | Sbjct 2143345 ACCTGGACGACCTCGTGCAGCTTCTGGAAGTCGAAACGCTCGTTGTGAAGGTCAACGTAA 2143286 Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCG 80952 | || || | || || || ||||| || || ||||| || | | | ||||| Sbjct 2143285 GTTGGGAGTGCAATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCG 2143226 Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTG 81012 | ||| || |||||||| || || || || || ||||| |||||||| |||| Sbjct 2143225 ATGATCTCGGTGCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTG 2143166 Query 81013 GCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGG 81072 ||| ||||| ||||||||| |||||| ||||| || |||||| || |||| ||| Sbjct 2143165 CGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGG 2143106 Query 81073 ATGGCGTCCCAAATCTC----GCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCAC 81128 || |||| ||| | || |||||| || || || || ||| || | Sbjct 2143105 ATAGCGTACCAGAGCTTCTGGGCGCGC----ACAGTCTCACGACCACGACCCTCGCCCTC 2143050 Query 81129 ATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 ||||| |||| |||||| || |||| | || | | || | ||| | ||||||| Sbjct 2143049 ATACTGCTCGTAGAGCTTC-TCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACT 2142991 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 | || || ||||| || ||| ||| || | ||| ||| ||||||||| || | Sbjct 2142990 CATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTG 2142931 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAG 81305 | |||||||||||| ||| || ||||| |||||| |||| || | || || || Sbjct 2142930 GTATCCAGAGGGCGTAGAAGAGATCGCG--AGCGCGAACCTCTTCCTTGCCGTGATTCTT 2142873 Query 81306 GCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGA 81365 ||| | ||||| ||| | | | || || ||||||||||||| || | ||||| | Sbjct 2142872 GCGGAGGTCGAGGAAGGCAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATG- 2142814 Query 81366 CCCCTTG-CG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421 | ||| | || ||| ||||||| ||||| ||||| || ||| || || |||| Sbjct 2142813 CACCTGGTCGTTTGTTGCCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCA 2142754 Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481 |||||||| || ||| | ||| ||||| || || ||| || || | || | Sbjct 2142753 GCATAGGGACGAGACCGTTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCAC 2142694 Query 81482 GCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCG 81539 | | | || ||| ||||||| |||||| | ||||| ||| ||| || Sbjct 2142693 GAATGCGATGTGCGTTG--AGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGT 2142636 Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599 || | || || || || ||||| ||||| || | |||||||| | | ||| || Sbjct 2142635 CTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGA 2142576 Query 81600 TGACATCTGAGGGCTTTT--TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 || | || | |||| | || ||| || || || ||||| | ||||| |||| Sbjct 2142575 TGCGAGCT--GTGCTTGTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAG 2142518 Query 81658 TAACGGTTTGACATCAGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAAT 81716 || ||| ||||| |||| || ||||| || | || | ||| || || || || || Sbjct 2142517 TACTTGTTGGACATGAGGTTGTAAGTTTCGATGGCAGCCT-CAATGTCCTCTCCATGTAT 2142459 Query 81717 ACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||||| ||| |||||||||| ||||| ||| || Sbjct 2142458 ACCGACAGCCACACGCATAATCATGTGCTGTGG 2142426 >seq13 Length=2085791 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || |||||||| || || |||||||||||||| | Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || ||||||||||||||||| ||||| ||||||||| Sbjct 973460 GACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCAG 973519 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||||||||| || ||||||| ||||| || | ||||| || Sbjct 973520 CAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAAC 973579 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||||| ||||| || | ||||| || ||||| Sbjct 973580 ATTCAGAAGGAGTCCACTCTGCATCTCGTTCTTCGTCTGCGAGGTGG 973626 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||||||||| | || || |||||| Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| || ||||| ||||||||||| ||||| ||||| ||| Sbjct 973688 GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 973747 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| |||||||| | ||||| | | ||||| || Sbjct 973748 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACGTTGTCTGACTACAAC 973807 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | || ||||| ||| | || | || | |||||||| ||||| ||| Sbjct 973808 ATTCAGAAGGAGAGCACCTTGCACTTGGTGCTTCGTCTTCGTGGTGGCCAA 973858 Score = 140 bits (154), Expect = 4e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 |||| |||||||| || || |||||||| ||||| |||| ||| | || | ||| Sbjct 973194 TTACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGATACCATCGACAACGTCAAGT 973253 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 | || || ||||||||||| || ||||| || ||||||||||| | || ||||| || | Sbjct 973254 CAAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAGCGCTTGATCTTTGCAGGCA 973313 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 |||| || ||||||| || ||||| | || || || | || ||||| || || || | Sbjct 973314 AGCAGCTTGAGGATGGCCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCTACCCTCC 973373 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||| | |||||||||||||| Sbjct 973374 ACCTAGTCCTTCGTCTTCGCGGTGG 973398 >seq6 Length=1630888 Score = 156 bits (172), Expect = 5e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || || ||||||||||| |||| || Sbjct 190661 CTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTAT 190602 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| ||||| || |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct 190601 CGACAATGTGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCT 190542 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||| || ||||| |||||||||| || || || ||||||| || |||| || Sbjct 190541 TATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAA 190482 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| || || |||||||| || | | ||||| ||||| Sbjct 190481 GGAGTCGACACTTCATCTTGTGCTCAGACTTCGAGGTGG 190443 >seq12 Length=4887340 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || |||||||| || || ||||| ||||| || | || | ||| | ||| | Sbjct 1403784 ACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGTCA 1403725 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| ||||||||||| || || ||||||||||||||||| || || || || ||| Sbjct 1403724 AAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAG 1403665 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | ||| || || | ||||| || |||| ||||| ||||| ||||| Sbjct 1403664 CAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCAC 1403605 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || ||||| ||||| Sbjct 1403604 CTGGTCCTACGACTTCGTGGTGG 1403582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310300195680