Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq13 118 9e-22
seq12 109 5e-19
>seq13
Length=2085791
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || |||||||| |||||| | || || ||||| || || | ||
Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || ||||| ||||| || ||
Sbjct 973460 GACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCAG 973519
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||| || || || | || || | || | ||||| ||||||
Sbjct 973520 CAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAAC 973579
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | ||| | ||| | ||| |||| ||||| ||
Sbjct 973580 ATTCAGAAGGAGTCCACTCTGCATCTCGTTCTTCGTCTGCGAGGTGGTAT 973629
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| || |||||| ||||||| | ||||| || | ||
Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || ||||||||||| || || || ||||| |||||
Sbjct 973688 GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 973747
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|||||| | || | ||| || || || | || ||| | || |||| || || |||||
Sbjct 973748 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGAC-GGCCGTACGTTGTCTGACTACAA 973806
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||| |||||| ||||| || ||||| | ||| | || ||||||
Sbjct 973807 CATTCAGAAGGAGAGCACCTTGCACTTGGTGCTTCGTCTTCGTGGTGGC 973855
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
|| |||||| | || || ||||| || || | || || | || || | ||||| |
Sbjct 973196 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGATACCATCGACAACGTCAAGTCA 973255
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| |||||||| ||||| || || ||||| || || | || |||||
Sbjct 973256 AAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAGCGCTTGATCTTTGCAGGCAAG 973315
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || || | ||| | || |||||||||||||| |||||||| ||| | ||
Sbjct 973316 CAGCTTGAGGATGGCCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCTACCCTCCAC 973375
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || | ||| | || ||||| ||
Sbjct 973376 CTAGTCCTTCGTCTTCGCGGTGGTAT 973401
>seq12
Length=4887340
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
|| || ||| |||| || || || ||||| | || ||| | || || | ||||| |
Sbjct 1403784 ACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGTCA 1403725
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||||||||| || ||||||||||| || || |||||| | || | |||||| ||
Sbjct 1403724 AAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAG 1403665
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || ||| || || ||||||| |||||||| || |||||||| ||| | ||
Sbjct 1403664 CAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCAC 1403605
Query 27192 TTGGTTTTGCGTTTGCGGGGTGG 27214
|||| | || | || |||||
Sbjct 1403604 CTGGTCCTACGACTTCGTGGTGG 1403582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918323889280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |