Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13 118 9e-22 seq12 109 5e-19 >seq13 Length=2085791 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || |||||||| |||||| | || || ||||| || || | || Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| ||||| || || Sbjct 973460 GACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCAG 973519 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || || || | || || | || | ||||| |||||| Sbjct 973520 CAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAAC 973579 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | ||| | ||| | ||| |||| ||||| || Sbjct 973580 ATTCAGAAGGAGTCCACTCTGCATCTCGTTCTTCGTCTGCGAGGTGGTAT 973629 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| || |||||| ||||||| | ||||| || | || Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||||||||| || || || ||||| ||||| Sbjct 973688 GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 973747 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 |||||| | || | ||| || || || | || ||| | || |||| || || ||||| Sbjct 973748 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGAC-GGCCGTACGTTGTCTGACTACAA 973806 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||| |||||| ||||| || ||||| | ||| | || |||||| Sbjct 973807 CATTCAGAAGGAGAGCACCTTGCACTTGGTGCTTCGTCTTCGTGGTGGC 973855 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || |||||| | || || ||||| || || | || || | || || | ||||| | Sbjct 973196 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGATACCATCGACAACGTCAAGTCA 973255 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| |||||||| ||||| || || ||||| || || | || ||||| Sbjct 973256 AAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAGCGCTTGATCTTTGCAGGCAAG 973315 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || || | ||| | || |||||||||||||| |||||||| ||| | || Sbjct 973316 CAGCTTGAGGATGGCCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCTACCCTCCAC 973375 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| | || ||||| || Sbjct 973376 CTAGTCCTTCGTCTTCGCGGTGGTAT 973401 >seq12 Length=4887340 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || || ||| |||| || || || ||||| | || ||| | || || | ||||| | Sbjct 1403784 ACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGTCA 1403725 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||||||||| || ||||||||||| || || |||||| | || | |||||| || Sbjct 1403724 AAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAG 1403665 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| || || ||||||| |||||||| || |||||||| ||| | || Sbjct 1403664 CAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCAC 1403605 Query 27192 TTGGTTTTGCGTTTGCGGGGTGG 27214 |||| | || | || ||||| Sbjct 1403604 CTGGTCCTACGACTTCGTGGTGG 1403582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918323889280