Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq13 167 5e-36 seq6 161 2e-34 seq11 100 7e-16 >seq13 Length=2085791 Score = 167 bits (184), Expect = 5e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| ||||| || || ||||| || || ||||| ||||||| ||||| Sbjct 973392 CGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 973333 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || |||||||||||||| ||||| | ||| || |||||||| |||| ||| Sbjct 973332 CGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCT 973273 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||||||||||||| || ||||| |||||||| || ||| || ||||| || Sbjct 973272 TCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGG 973213 Query 211074 GTGATCGTCTTTCCCGT 211090 ||||| ||||| || || Sbjct 973212 GTGATGGTCTTGCCAGT 973196 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || ||||||||||| || || ||||| || || | || || | ||||| Sbjct 973611 AGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCC 973552 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| || |||| || ||||||||| Sbjct 973551 TCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC 973492 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||||||| |||||||| || ||||| ||| Sbjct 973491 TGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 973432 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| ||||| | ||||| Sbjct 973431 TTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | ||| ||| || || ||||| || || | | || Sbjct 973849 ACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGT 973790 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || |||||||| || |||||||| || || || || || || |||| || Sbjct 973789 ACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACC 973730 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| ||||| || ||||| ||||| || || || || | Sbjct 973729 CTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAA 973670 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || ||||||||||| || || | ||||| Sbjct 973669 TGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq6 Length=1630888 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| || ||||| ||||| || ||||| || |||||||| || || | || || Sbjct 190449 CGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTG 190508 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || |||||||| || || |||||||| ||||| ||||| || |||| || Sbjct 190509 CGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCC 190568 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || ||||| ||||| ||||| || ||||| || || ||| ||||||||||| Sbjct 190569 TCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGG 190628 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| ||||| |||||||| ||||| || || Sbjct 190629 GTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660 >seq11 Length=3629084 Score = 100 bits (110), Expect = 7e-16 Identities = 189/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 |||| |||||| ||||||||||| | | | ||||| ||||| ||| | || | Sbjct 2143189 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTG 2143130 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 || ||| | ||||| | | || || | ||| |||| |||||| || ||||||| Sbjct 2143129 CCAGTCTCGGTTTGAGACTCAAGGATAGCGTACCAGAGCTTCTGGGCGCGCACAGTCTCA 2143070 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | || || ||| |||| | |||||||| ||| || ||| |||||||||| Sbjct 2143069 CGACCACGACCCTCGCCCTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACA 2143010 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327 || | || ||||| |||||| || || | |||| |||||| |||| || || Sbjct 2143009 TCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACA 2142950 Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || ||||||||||| || | |||||| ||| ||||| Sbjct 2142949 CGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAA 2142912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151792077110