Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq13 167 5e-36
seq6 161 2e-34
seq11 100 7e-16
>seq13
Length=2085791
Score = 167 bits (184), Expect = 5e-36
Identities = 155/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| ||||| || || ||||| || || ||||| ||||||| |||||
Sbjct 973392 CGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 973333
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || |||||||||||||| ||||| | ||| || |||||||| |||| |||
Sbjct 973332 CGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCT 973273
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||||||||||||| || ||||| |||||||| || ||| || ||||| ||
Sbjct 973272 TCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGG 973213
Query 211074 GTGATCGTCTTTCCCGT 211090
||||| ||||| || ||
Sbjct 973212 GTGATGGTCTTGCCAGT 973196
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || ||||||||||| || || ||||| || || | || || | |||||
Sbjct 973611 AGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCC 973552
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| | || || ||||| || |||| || |||||||||
Sbjct 973551 TCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC 973492
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||||||| |||||||| || ||||| |||
Sbjct 973491 TGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 973432
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| ||||| | |||||
Sbjct 973431 TTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 98.7 bits (108), Expect = 2e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| | ||| ||| || || ||||| || || | | ||
Sbjct 973849 ACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGT 973790
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || |||||||| || || || || || || |||| ||
Sbjct 973789 ACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACC 973730
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| || ||||| ||||| || ||||| ||||| || || || || |
Sbjct 973729 CTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAA 973670
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || ||||||||||| || || | |||||
Sbjct 973669 TGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq6
Length=1630888
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|||||||| || ||||| ||||| || ||||| || |||||||| || || | || ||
Sbjct 190449 CGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTG 190508
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || |||||||| || || |||||||| ||||| ||||| || |||| ||
Sbjct 190509 CGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCC 190568
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| || ||||| ||||| ||||| || ||||| || || ||| |||||||||||
Sbjct 190569 TCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGG 190628
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| ||||| |||||||| ||||| || ||
Sbjct 190629 GTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660
>seq11
Length=3629084
Score = 100 bits (110), Expect = 7e-16
Identities = 189/278 (68%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147
|||| |||||| ||||||||||| | | | ||||| ||||| ||| | || |
Sbjct 2143189 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAGCATCCTTGTAGAGCATGTATGGGGTG 2143130
Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207
|| ||| | ||||| | | || || | ||| |||| |||||| || |||||||
Sbjct 2143129 CCAGTCTCGGTTTGAGACTCAAGGATAGCGTACCAGAGCTTCTGGGCGCGCACAGTCTCA 2143070
Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267
| || || ||| |||| | |||||||| ||| || ||| ||||||||||
Sbjct 2143069 CGACCACGACCCTCGCCCTCATACTGCTCGTAGAGCTTCTCAAACTCCTCTCCATAGACA 2143010
Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327
|| | || ||||| |||||| || || | |||| |||||| |||| || ||
Sbjct 2143009 TCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTCCACTCGCCGTTGGACTCGACA 2142950
Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| ||||||||||| || | |||||| ||| |||||
Sbjct 2142949 CGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAA 2142912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151792077110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |