Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 141 2e-28 seq13 134 3e-26 seq6 122 2e-22 seq1 111 4e-19 >seq12 Length=4887340 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||||| ||||| || ||||| || || |||| ||||| |||| | ||| Sbjct 1403587 ACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 1403646 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||| || || || || Sbjct 1403647 GCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCC 1403706 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| ||| ||| ||||| |||||||| | ||||| || | Sbjct 1403707 CTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAG 1403766 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| ||||| Sbjct 1403767 GGTGATAGTCTTACCCGT 1403784 >seq13 Length=2085791 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || |||||||| || || || | ||||| |||| || ||| | ||||| Sbjct 973611 AGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCC 973552 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | ||| || ||||| || ||||| || |||||||| Sbjct 973551 TCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC 973492 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| |||| || || || | ||||| ||| Sbjct 973491 TGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 973432 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | || | |||||| Sbjct 973431 TTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| |||||||| || || || || || | |||||||| | | || Sbjct 973392 CGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 973333 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| || || ||||| | || || ||||| || ||||| ||| Sbjct 973332 CGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCT 973273 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| ||||||||| ||| || |||||||| ||||||| || || || | Sbjct 973272 TCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGG 973213 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 973212 GTGATGGTCTTGCCAGT 973196 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| | ||| || || || | ||||| || | ||| || Sbjct 973849 ACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGT 973790 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || || || || |||||||| Sbjct 973789 ACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACC 973730 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||||||| ||||| ||||| || | || || ||||| Sbjct 973729 CTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAA 973670 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | ||| || | ||| | |||||| Sbjct 973669 TGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq6 Length=1630888 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 |||||||| || ||||| || || || || || || |||| ||||| || | | || Sbjct 190449 CGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTG 190508 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| || || |||||||| ||||| ||||| || ||||| || Sbjct 190509 CGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCC 190568 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || || || || ||||| ||||||| ||||| || || |||| || || || | Sbjct 190569 TCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGG 190628 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| ||||||||||| Sbjct 190629 GTGATGGTCTTGCCCGT 190645 >seq1 Length=30948 Score = 111 bits (122), Expect = 4e-19 Identities = 195/278 (70%), Gaps = 7/278 (3%) Strand=Plus/Minus Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTAT 7502 ||||| |||||||||| ||||| || ||||| |||||| ||| || | | || Sbjct 30479 TTATACTTAATATTTGCCTTATTTTCAGG-ATTATTAGGTACAGCATTCTCAGTTTTAAT 30421 Query 7503 AAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTACA 7561 || |||||||| ||| || ||| ||| |||||| | ||| ||| | || | Sbjct 30420 GAGAATAGAATTATCTGGGCCAGGTGTACAATATATTGCA-GACAAT---CAATTATATA 30365 Query 7562 ACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621 | ||| ||||| || || || | ||||||| ||||| | || ||||| | | | Sbjct 30364 ATAGTATAATTACAGCACACGCTATACTTATGATATTCTTCATGGTAATGCCTGCATTAA 30305 Query 7622 TAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTC 7681 |||| || || || || | || | || |||||| |||| | ||||||||||||||||| Sbjct 30304 TAGGAGGATTTGGTAACTTTTTATTACCATTAATGGTTGGAGGTCCTGATATGGCTTTTC 30245 Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 || | | || ||||||||||| |||||| |||| ||| Sbjct 30244 CACGTTTAAATAATATAAGTTTCTGATTATTACCACCT 30207 Score = 95.1 bits (104), Expect = 3e-14 Identities = 97/124 (78%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 371364 AAATGGTAATTTATGCATAGATAA-ACCAGGTACTCTCATATTAAATATCGTAGTAATAA 371422 || || ||||||||| | | ||| ||| || ||||||||| ||||| || ||||||| Sbjct 29979 AAGTGCTAATTTATGTA-ATCTAACACCTGGACTTCTCATATTCAATATTGTTGTAATAA 30037 Query 371423 AGTTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAAT 371482 |||| ||||| |||| |||| | |||||||| | |||||||| |||||| ||||||| Sbjct 30038 AGTTCATAGCTCCTAAAAGACTACTTATACCTGATAAATGTAAACCAAATATAGCTAAAT 30097 Query 371483 CGAC 371486 | || Sbjct 30098 CTAC 30101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530986089716