Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 118 2e-21 seq6 111 4e-19 seq13 93.3 1e-13 seq11 84.2 5e-11 >seq12 Length=4887340 Score = 118 bits (130), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| || ||||| || ||||| || ||||||||||| |||| | ||| | Sbjct 1403591 AGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGA 1403650 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 || || || || ||||| ||||||||||| || | ||||||||| | | || || | Sbjct 1403651 CCGTCCTCAAGCTGCTTT--CCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCT 1403708 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| |||||||| ||| |||||| | || | |||||||| ||| || || || | Sbjct 1403709 CCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGG 1403768 Query 152065 TAATAGTTTTGCCCGTGA 152082 | ||||| || ||||||| Sbjct 1403769 TGATAGTCTTACCCGTGA 1403786 >seq6 Length=1630888 Score = 111 bits (122), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| ||||||||||| || ||||| || ||||||||||| || | | || | Sbjct 190452 AGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGG 190511 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || ||||| ||||| |||||||| | |||||||| | | || || | Sbjct 190512 CCATCCTCGAGCTGCTTT--CCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCT 190569 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 | || || ||||| || || ||| | || | | || || ||| || || || | Sbjct 190570 CTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGG 190629 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | || || ||||||||||| |||||||||||| Sbjct 190630 TGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 190661 >seq13 Length=2085791 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCG 151970 ||| || || |||||||| || | || || | || || || || ||||| || ||| Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTT--CCAGCG 973762 Query 151971 AAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACA 152030 ||||| || | |||||| || | | || || ||||| |||||||| || || ||| Sbjct 973761 AAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACA 973702 Query 152031 GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090 | || | |||| || ||| ||||| | |||||||| ||||| ||||||||||| Sbjct 973701 TTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTG 973642 Query 152091 ACGAAGACCTGCAT 152104 ||||||| ||||| Sbjct 973641 ACGAAGATTTGCAT 973628 >seq11 Length=3629084 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||| ||| | |||| | | ||||| || |||||||| ||| || | ||||| |||| Sbjct 2142912 TTCTACGCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCCAACGGCGAGTGG 2142971 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | ||| | ||||| ||||| ||| || |||| ||||| ||||| ||||||||| Sbjct 2142972 ACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGAGAGGAGTTTGAG 2143031 Query 115749 AATCTTTACGAAAGGTACGAGAAAGAGGG 115777 || || ||||| ||| ||| ||||| Sbjct 2143032 AAGCTCTACGAGCAGTATGAGGGCGAGGG 2143060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820593033394