Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 2e-21
seq6 111 4e-19
seq13 93.3 1e-13
seq11 84.2 5e-11
>seq12
Length=4887340
Score = 118 bits (130), Expect = 2e-21
Identities = 146/198 (74%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||||| || ||||| || ||||| || ||||||||||| |||| | ||| |
Sbjct 1403591 AGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGA 1403650
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|| || || || ||||| ||||||||||| || | ||||||||| | | || || |
Sbjct 1403651 CCGTCCTCAAGCTGCTTT--CCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCT 1403708
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| |||||||| ||| |||||| | || | |||||||| ||| || || || |
Sbjct 1403709 CCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGG 1403768
Query 152065 TAATAGTTTTGCCCGTGA 152082
| ||||| || |||||||
Sbjct 1403769 TGATAGTCTTACCCGTGA 1403786
>seq6
Length=1630888
Score = 111 bits (122), Expect = 4e-19
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||||||| ||||||||||| || ||||| || ||||||||||| || | | || |
Sbjct 190452 AGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGG 190511
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
||||| || || ||||| ||||| |||||||| | |||||||| | | || || |
Sbjct 190512 CCATCCTCGAGCTGCTTT--CCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCT 190569
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
| || || ||||| || || ||| | || | | || || ||| || || || |
Sbjct 190570 CTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGG 190629
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| || || ||||||||||| ||||||||||||
Sbjct 190630 TGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 190661
>seq13
Length=2085791
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCG 151970
||| || || |||||||| || | || || | || || || || ||||| || |||
Sbjct 973819 CTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTT--CCAGCG 973762
Query 151971 AAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACA 152030
||||| || | |||||| || | | || || ||||| |||||||| || || |||
Sbjct 973761 AAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACA 973702
Query 152031 GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090
| || | |||| || ||| ||||| | |||||||| ||||| |||||||||||
Sbjct 973701 TTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTG 973642
Query 152091 ACGAAGACCTGCAT 152104
||||||| |||||
Sbjct 973641 ACGAAGATTTGCAT 973628
>seq11
Length=3629084
Score = 84.2 bits (92), Expect = 5e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688
||||| ||| | |||| | | ||||| || |||||||| ||| || | ||||| ||||
Sbjct 2142912 TTCTACGCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCCAACGGCGAGTGG 2142971
Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748
| ||| | ||||| ||||| ||| || |||| ||||| ||||| |||||||||
Sbjct 2142972 ACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGAGAGGAGTTTGAG 2143031
Query 115749 AATCTTTACGAAAGGTACGAGAAAGAGGG 115777
|| || ||||| ||| ||| |||||
Sbjct 2143032 AAGCTCTACGAGCAGTATGAGGGCGAGGG 2143060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820593033394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |