Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq13 161 2e-34 seq12 156 9e-33 seq6 141 2e-28 >seq13 Length=2085791 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| || || ||||| || || || ||||||||||||| Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| ||||| ||||| || || || || || ||||| | ||| || || || ||| Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||| ||||| || || | ||||| |||||||| | ||||| Sbjct 973734 ATACCCTCCTTGTCTTGAATC-TTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGAC 973676 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || || | |||||| ||||| || ||||| Sbjct 973675 TTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| || ||||| | ||| || || || ||||||||||| | Sbjct 973627 ACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 973568 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 973567 CAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGG 973508 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || ||| | ||||||||||| || | || || Sbjct 973507 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAAC 973448 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| |||||| || || || ||||| Sbjct 973447 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | || || || || |||||||| || | Sbjct 973399 ACCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 973340 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || ||||||||||| || || |||||| || Sbjct 973339 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGG 973280 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||||| || ||| | ||||| || || || | ||||| Sbjct 973279 AATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGAC 973220 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 973219 CTCAAGGGTGATGGTCTTGCCAGT 973196 >seq12 Length=4887340 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | ||| || || |||||||||||||| | Sbjct 1403581 ACCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1403640 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || ||||| || || || ||||| ||||||| ||| || ||||| || Sbjct 1403641 AAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGG 1403700 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||| ||||||| || || | ||||| ||||| |||| || || Sbjct 1403701 TATGCCCTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCAC 1403760 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||||||||| Sbjct 1403761 CTCGAGGGTGATAGTCTTACCCGT 1403784 Score = 84.2 bits (92), Expect = 5e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| || | |||||| | ||||| ||||||||||| ||||| || | || Sbjct 3658695 TCGGCATGAACTCTAAGCTCATGTGCCAATACATCGAATTCGTTGCTGACCGCCTGTTGC 3658754 Query 230287 TGGCGCTAGGGTACGAGAAAGT-GTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTC 230345 | || || || || | |||| || ||| | ||||| |||| || |||||| | Sbjct 3658755 TCGCCCTTGGCAAC-ACCAAGTACTACAACGCTGTCAACCCATTCGACTTCATGGAGAAC 3658813 Query 230346 ATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA 230395 || || || || || || ||||||||||| ||||||||| |||| || Sbjct 3658814 ATCTCGCTTGCTGGCAAGACGAACTTCTTCGAGAAGCGTGTCGGCGACTA 3658863 >seq6 Length=1630888 Score = 141 bits (156), Expect = 2e-28 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | || || ||||| | || || || |||||||||||||| | Sbjct 190442 ACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGA 190501 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||||||||| | |||||| ||||| || Sbjct 190502 GAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGG 190561 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||| || || || ||| ||||| || || | |||||||| || || | || | Sbjct 190562 AATGCCCTCTTTATCCTGAATC-TTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAA 190620 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 | ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 190621 CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739012241156