Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq13 161 2e-34
seq12 156 9e-33
seq6 141 2e-28
>seq13
Length=2085791
Score = 161 bits (178), Expect = 2e-34
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| |||| || || ||||| || || || |||||||||||||
Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| ||| ||||| ||||| || || || || || ||||| | ||| || || || |||
Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||| ||| ||||| || || | ||||| |||||||| | |||||
Sbjct 973734 ATACCCTCCTTGTCTTGAATC-TTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGAC 973676
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || ||||| || || | |||||| ||||| || |||||
Sbjct 973675 TTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| ||||| || ||||| | ||| || || || ||||||||||| |
Sbjct 973627 ACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 973568
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || || || |||||||| || || ||||| ||
Sbjct 973567 CAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGG 973508
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | ||||||||||| || | || ||
Sbjct 973507 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAAC 973448
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || |||| |||||| || || || |||||
Sbjct 973447 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || ||||| || || || | || || || || |||||||| || |
Sbjct 973399 ACCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 973340
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || ||||||||||| || || |||||| ||
Sbjct 973339 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGG 973280
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || |||||||| |||||||||| || ||| | ||||| || || || | |||||
Sbjct 973279 AATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGAC 973220
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 973219 CTCAAGGGTGATGGTCTTGCCAGT 973196
>seq12
Length=4887340
Score = 156 bits (172), Expect = 9e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || ||||| || | ||| || || |||||||||||||| |
Sbjct 1403581 ACCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1403640
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| || ||||| || || || ||||| ||||||| ||| || ||||| ||
Sbjct 1403641 AAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGG 1403700
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||||||||| ||||||| || || | ||||| ||||| |||| || ||
Sbjct 1403701 TATGCCCTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCAC 1403760
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| ||||| |||||||||||
Sbjct 1403761 CTCGAGGGTGATAGTCTTACCCGT 1403784
Score = 84.2 bits (92), Expect = 5e-11
Identities = 122/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286
|||||||||| || | |||||| | ||||| ||||||||||| ||||| || | ||
Sbjct 3658695 TCGGCATGAACTCTAAGCTCATGTGCCAATACATCGAATTCGTTGCTGACCGCCTGTTGC 3658754
Query 230287 TGGCGCTAGGGTACGAGAAAGT-GTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTC 230345
| || || || || | |||| || ||| | ||||| |||| || |||||| |
Sbjct 3658755 TCGCCCTTGGCAAC-ACCAAGTACTACAACGCTGTCAACCCATTCGACTTCATGGAGAAC 3658813
Query 230346 ATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA 230395
|| || || || || || ||||||||||| ||||||||| |||| ||
Sbjct 3658814 ATCTCGCTTGCTGGCAAGACGAACTTCTTCGAGAAGCGTGTCGGCGACTA 3658863
>seq6
Length=1630888
Score = 141 bits (156), Expect = 2e-28
Identities = 165/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || | || || ||||| | || || || |||||||||||||| |
Sbjct 190442 ACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGA 190501
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||||||||||||||| || || || ||||||||||| | |||||| ||||| ||
Sbjct 190502 GAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGG 190561
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| ||||| || || || ||| ||||| || || | |||||||| || || | || |
Sbjct 190562 AATGCCCTCTTTATCCTGAATC-TTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAA 190620
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 190621 CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739012241156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |