Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 1e-25
seq13 118 8e-22
seq12 114 9e-21
>seq6
Length=1630888
Score = 131 bits (144), Expect = 1e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || |||| ||||| | ||| || ||||| || |||||| ||||||||||| ||
Sbjct 190440 ATACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCT 190499
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| ||| ||| | || || |||||||| ||||||||||| | ||| ||||| ||||
Sbjct 190500 GAGAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGT 190559
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287
|| | || || || ||| ||||| ||||| | | || || |||| ||| ||
Sbjct 190560 GGAATGCCCTCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCA 190619
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||||| | || || ||||| |||||||||||||||||||||
Sbjct 190620 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 190661
>seq13
Length=2085791
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| | ||||||||||| || |||||||| || | | || |||| ||
Sbjct 973837 CACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTC 973778
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| | |||||||||||||| || | ||| ||||| ||
Sbjct 973777 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTG 973718
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||| | || || || || | ||||| |||||
Sbjct 973717 AATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTT 973658
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||||||
Sbjct 973657 GCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
Score = 111 bits (122), Expect = 1e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| ||| | | || || || || ||| |||||| || ||||||||
Sbjct 973633 TTGCATACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTA 973574
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| || || | || || |||||||| || || |||||||| |||||||| ||
Sbjct 973573 GTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTC 973514
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| |||||| ||| | | | || ||||| | |||
Sbjct 973513 TGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGA 973454
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || || || ||||| || |||||||||||
Sbjct 973453 CTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| || ||||||||||| | ||| ||| | || ||
Sbjct 973380 ACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCCTCA 973321
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||||||||| |||||||| || | || | |||||||| |||
Sbjct 973320 AGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 973261
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| || | ||| || ||||| | || || |||||
Sbjct 973260 ATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTG 973201
Query 44309 CCCGT 44313
|| ||
Sbjct 973200 CCAGT 973196
>seq12
Length=4887340
Score = 114 bits (126), Expect = 9e-21
Identities = 140/189 (74%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||||| ||| |||||| ||||||||||| |||| || ||| |||| ||
Sbjct 1403600 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCA 1403659
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||||| ||||||||| |||| || | || ||||| ||
Sbjct 1403660 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1403719
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || ||||| | || |||||||| | || || ||||
Sbjct 1403720 ATCTTTGACTTGACATTGT--CGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCT 1403777
Query 44307 TTCCCGTGA 44315
| |||||||
Sbjct 1403778 TACCCGTGA 1403786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990338576638
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |