Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 131 1e-25 seq13 118 8e-22 seq12 114 9e-21 >seq6 Length=1630888 Score = 131 bits (144), Expect = 1e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| ||||| | ||| || ||||| || |||||| ||||||||||| || Sbjct 190440 ATACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCT 190499 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| ||| | || || |||||||| ||||||||||| | ||| ||||| |||| Sbjct 190500 GAGAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGT 190559 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | || || || ||| ||||| ||||| | | || || |||| ||| || Sbjct 190560 GGAATGCCCTCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCA 190619 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||||| | || || ||||| ||||||||||||||||||||| Sbjct 190620 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 190661 >seq13 Length=2085791 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | ||||||||||| || |||||||| || | | || |||| || Sbjct 973837 CACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTC 973778 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | |||||||||||||| || | ||| ||||| || Sbjct 973777 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTG 973718 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||| | || || || || | ||||| ||||| Sbjct 973717 AATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTT 973658 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| Sbjct 973657 GCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| ||| | | || || || || ||| |||||| || |||||||| Sbjct 973633 TTGCATACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTA 973574 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || || | || || |||||||| || || |||||||| |||||||| || Sbjct 973573 GTCGGACAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTC 973514 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| ||| |||||| ||| | | | || ||||| | ||| Sbjct 973513 TGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGA 973454 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| || || || ||||| || ||||||||||| Sbjct 973453 CTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| || ||||||||||| | ||| ||| | || || Sbjct 973380 ACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCCTCA 973321 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||||||||| |||||||| || | || | |||||||| ||| Sbjct 973320 AGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 973261 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| || | ||| || ||||| | || || ||||| Sbjct 973260 ATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTG 973201 Query 44309 CCCGT 44313 || || Sbjct 973200 CCAGT 973196 >seq12 Length=4887340 Score = 114 bits (126), Expect = 9e-21 Identities = 140/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| ||| |||||| ||||||||||| |||| || ||| |||| || Sbjct 1403600 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCA 1403659 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| ||||||||| |||| || | || ||||| || Sbjct 1403660 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1403719 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | || |||||||| | || || |||| Sbjct 1403720 ATCTTTGACTTGACATTGT--CGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCT 1403777 Query 44307 TTCCCGTGA 44315 | ||||||| Sbjct 1403778 TACCCGTGA 1403786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990338576638