Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6 161 2e-34 seq13 149 2e-30 seq12 143 6e-29 >seq6 Length=1630888 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| || ||||| || || || |||||||||||||| || ||| || || ||| Sbjct 190660 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATC 190601 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || ||||||||||| ||||| || || || || ||||||||||| ||| Sbjct 190600 GACAATGTGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCTT 190541 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| |||||||| |||||||| ||||| | || || | || || ||| |||| || Sbjct 190540 ATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAAG 190481 Query 178110 GAATCAACACTGCATCTTGTTTTGAGACT 178138 || || ||||| |||||||| | ||||| Sbjct 190480 GAGTCGACACTTCATCTTGTGCTCAGACT 190452 >seq13 Length=2085791 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| || || || || |||||||| ||||| || ||| ||| Sbjct 973403 CAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 973462 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 973463 ACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCAGCAG 973522 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || ||||| | ||||| |||| || ||| | Sbjct 973523 CGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAACATT 973582 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || |||||||| ||| Sbjct 973583 CAGAAGGAGTCCACTCTGCATCTCGTT 973609 >seq12 Length=4887340 Score = 143 bits (158), Expect = 6e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||||||||||||||| |||||||| ||||| || ||||| Sbjct 1403786 TCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGT 1403727 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||||||| ||||| || || || || || |||||||| || || ||||||||||||| Sbjct 1403726 CAAAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAA 1403667 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | |||||| |||| || ||| |||| || || || || || | Sbjct 1403666 AGCAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 1403607 Query 178123 ATCTTGT 178129 | || || Sbjct 1403606 ACCTGGT 1403600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730984080716