Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq13 129 5e-25 seq12 122 8e-23 seq6 100 3e-16 >seq13 Length=2085791 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || |||||||| ||| ||||||||||||||| |||||||| Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| || ||||| |||| ||||| ||||| | ||| Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | ||| | | | |||||| ||||| || Sbjct 973506 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAAC 973448 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || ||||| ||||| || || || ||||| Sbjct 973447 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| |||| |||||||||||||||||||| ||||| || Sbjct 973855 GCCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 973796 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || || |||| ||||||||||| || ||||| || || ||||| || || | || Sbjct 973795 CAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGG 973736 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | ||||||||| || || |||| || | | | ||||| ||||| | Sbjct 973735 AATACCCTCCTTGTCTTGAATCTTGCTCTTC-ACATTGTCGATTGTGTCCGATGACTCGA 973677 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || || || || || || ||||| ||||| || ||||| Sbjct 973676 CTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || || ||||||||||||||| || || ||| Sbjct 973398 CCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAG 973339 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| || || |||| |||||| ||||| | ||| Sbjct 973338 AGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGA 973279 Query 41756 ACGCTCTCCTTGTCCATGATTTTT 41779 | || ||||||||| ||| ||| Sbjct 973278 ATGCCTTCCTTGTCCTGGATCTTT 973255 >seq12 Length=4887340 Score = 122 bits (134), Expect = 8e-23 Identities = 155/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || |||| ||||| || || ||| ||||||||| ||||| |||||| Sbjct 1403579 CCACCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1403638 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || || ||||| |||| || |||||||| |||||||| ||||| ||||| ||||| | Sbjct 1403639 GAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGT 1403698 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGAC 41809 || | || ||||||||| ||| | |||| ||| || | ||| ||||| ||| Sbjct 1403699 GGTATGCCCTCCTTGTCT-TGAATCTTTGACTTGACATTGTCGATT--GTGTCTGAAGAC 1403755 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGT 41838 |||||||| | || || || |||||||| Sbjct 1403756 TCCACCTCGAGGGTGATAGTCTTACCCGT 1403784 >seq6 Length=1630888 Score = 100 bits (110), Expect = 3e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| ||||| || || ||||||||| ||||| ||||| ||||| ||||| | || || Sbjct 190460 CACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTC 190519 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| ||||| || || || || || ||||| | |||| || ||| || ||| Sbjct 190520 GAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCCTG 190579 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || |||| || | | | ||| ||| ||||| ||||| | || || || | Sbjct 190580 AATCTTGCTCTTC-ACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTCT 190638 Query 41832 TACCCGTCAGCGTCTTTACGAA 41853 | ||||| || ||||| ||||| Sbjct 190639 TGCCCGTGAGGGTCTTCACGAA 190660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303919096800