Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq29 138 1e-27 seq13 100 3e-16 >seq29 Length=375576 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||| ||||||||||| || || ||||| |||| || || || | || ||| Sbjct 277927 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCT 277868 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||||||||| ||||| || || ||||||||||| | || | | |||||| ||| | Sbjct 277867 AGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCAGGGGGGATACCCTCCTTATCCTGG 277808 Query 43095 ATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 || || |||| ||| | | | |||||| |||||||| || | ||||||||| || Sbjct 277807 ATCTTGCTCTTGA-CGTTGTCGATGGTGTCGGATGATTCCACTTCCAGCGTGATGGTCTT 277749 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| || ||||||||||| Sbjct 277748 GCCAGTGAGTGTCTTGACGAAGATTTGCAT 277719 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||| ||| || || | || || |||||||| |||||||| Sbjct 277172 CTCCTTCTGAATGTTGTAATCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAA 277113 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | || ||||||||| ||| | || | |||| || Sbjct 277112 GATGAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTGGACTTGA-CG 277055 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | | |||||| || || || |||| |||||||| ||||| || Sbjct 277054 TTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 277005 Score = 86.0 bits (94), Expect = 7e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || |||||||| |||||||| Sbjct 277454 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAA 277395 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| || | || | | | ||| Sbjct 277394 AATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTGTCC-TGGATCTTGGACTTAACGT 277336 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || |||| |||||||| || || || || ||||| | Sbjct 277335 TGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGA 277276 Query 43171 C 43171 | Sbjct 277275 C 277275 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || || ||||| || ||||| Sbjct 277682 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCCAGTTGCTTGCCCGCGAA 277623 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 ||||| || |||||||| | || | || |||||||| ||| | |||| |||| Sbjct 277622 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCT-TGAATCTTTGACTTGACGT 277564 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || |||| || ||||| || || || || ||||| | Sbjct 277563 TATCGATGGTGTCCGACGACTCTACTTCGAGGGTAATGGTCTTTCCGGTGAGAGTCTTGA 277504 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 277503 CGAAGATTTGCAT 277491 >seq13 Length=663050 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| |||||||| | Sbjct 197566 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 197625 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 197626 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 197684 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 197685 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 197744 Query 43173 AA 43174 || Sbjct 197745 AA 197746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571812596596000