Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq29 113 3e-20 seq13 89.7 3e-13 >seq29 Length=375576 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||||| ||| || ||||| |||||||||||||||| ||| | || Sbjct 277702 AGGACCAGGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCC 277643 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||| ||||| ||||| || |||||||| ||| | || |||||||| Sbjct 277642 TCCAGTTGCTTGCCCGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 277583 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | || | || | ||| || || || | || ||||| Sbjct 277582 TGAATCTTTGACTTGACGTTATCGATGGTGTCCGACGACTCTACTTCGAGGGTAATGGTC 277523 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||||||||| || || ||||| ||||| Sbjct 277522 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 277491 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| ||| | || || || ||||| ||||||||||| || Sbjct 277945 CCACCACGCAGACGGAGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAG 277886 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || ||||| || || ||||||||||| ||| Sbjct 277885 AGGGTGCGGCCATCCTCTAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCAGGGGGG 277826 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | | | | || | |||| ||||| || Sbjct 277825 ATACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGATGATTCCACT 277766 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||| ||||| ||||| || || || ||||| ||||| Sbjct 277765 TCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACGAAGATTTGCAT 277719 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| |||||||||||||| || ||| | || Sbjct 277474 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 277415 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||||||||| |||||||||||| || | | ||||||||| Sbjct 277414 TCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTGTCC 277355 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | || || || || | |||||||| Sbjct 277354 TGGATCTTGGACTTAACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTC 277295 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 || |||||||| || || || Sbjct 277294 TTTCCGGTGAGGGTCTTGAC 277275 >seq13 Length=663050 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| ||| | || || | ||||||||| ||||| || Sbjct 197568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 197627 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | || ||||||||| ||||| ||| | | | | Sbjct 197628 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 197687 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | ||| |||| |||||||| | || ||||| || || || || || || || || Sbjct 197688 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 197746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069243792000