Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq221 140 2e-28 seq1 87.8 1e-12 >seq221 Length=8115 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 6809 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6750 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6749 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6715 >seq1 Length=2159518 Score = 87.8 bits (96), Expect = 1e-12 Identities = 196/290 (68%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | ||||||||||| || ||||| ||||||| Sbjct 469827 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCCAAGGTCGAAGGCAAGGGCAACGGTA 469884 Query 6259 TTAAAACCGTCATTGTCAACAT-GCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACC 6317 | || ||||| | |||||| | | || ||||| ||| | || | || ||| | | Sbjct 469885 TCAAGACCGTTGTCGTCAACCTCGACT-CTGTCGCCAAGTCTCTGAGCCGTCCTCCTGCA 469943 Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377 |||| | || || ||||| | ||||| || || ||| | | | | || || Sbjct 469944 TACCTCATCAAGTACTTCGGTTTTGAACTCGGTGCCCAGGCCAACGCCAAGCCCACCGAC 470003 Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437 || |||| ||| | ||||| || || | | ||||||| ||||||| || || || Sbjct 470004 GAACGCTGGATCATCAACGGTTCCCACGATGCCCCCAAGCTCCAGGACTACCTCGATGGT 470063 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || ||| |||||| || || || | | ||| | ||||| || ||||| Sbjct 470064 TTCATTTCCAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCCGAAACCGA 470113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944342481700