Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03-
24] 700 sequences; 31,454,985 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq221 140 2e-28
seq1 87.8 1e-12
>seq221
Length=8115
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 6809 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6750
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6749 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6715
>seq1
Length=2159518
Score = 87.8 bits (96), Expect = 1e-12
Identities = 196/290 (68%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | ||||||||||| || ||||| |||||||
Sbjct 469827 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCCAAGGTCGAAGGCAAGGGCAACGGTA 469884
Query 6259 TTAAAACCGTCATTGTCAACAT-GCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACC 6317
| || ||||| | |||||| | | || ||||| ||| | || | || ||| | |
Sbjct 469885 TCAAGACCGTTGTCGTCAACCTCGACT-CTGTCGCCAAGTCTCTGAGCCGTCCTCCTGCA 469943
Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377
|||| | || || ||||| | ||||| || || ||| | | | | || ||
Sbjct 469944 TACCTCATCAAGTACTTCGGTTTTGAACTCGGTGCCCAGGCCAACGCCAAGCCCACCGAC 470003
Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437
|| |||| ||| | ||||| || || | | ||||||| ||||||| || || ||
Sbjct 470004 GAACGCTGGATCATCAACGGTTCCCACGATGCCCCCAAGCTCCAGGACTACCTCGATGGT 470063
Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| ||| |||||| || || || | | ||| | ||||| || |||||
Sbjct 470064 TTCATTTCCAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCCGAAACCGA 470113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944342481700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |