Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 seq7 91.5 1e-13 seq29 89.7 5e-13 >seq13 Length=663050 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || |||||| ||||| Sbjct 197568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 197627 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || ||||||||||||||| ||| || ||||| |||| || Sbjct 197628 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 197686 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 197687 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 197746 Query 127105 A 127105 | Sbjct 197747 A 197747 >seq7 Length=913940 Score = 91.5 bits (100), Expect = 1e-13 Identities = 243/371 (65%), Gaps = 33/371 (9%) Strand=Plus/Plus Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282 |||||||| ||||| || ||||||||| ||||| | || || || || ||||| || Sbjct 895601 ATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGAC 895660 Query 47283 TTTGCCTGTCTCTACTACA---AC----ACTAGAGTC--GATCAAAAGTTGGACGTGCCC 47333 ||||| |||||| || | || || | | | |||| ||| | | || | Sbjct 895661 TTTGCTTGTCTCCTCTTCTCTCACCTCAACCACCGCCCCGATCCCAAGGTTGTCGAG--- 895717 Query 47334 ACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCT 47393 ||||| ||| ||| ||||||| ||| ||| |||||| || | || ||| Sbjct 895718 ---------GACATTATTGTCGAGGCCGTCGGCATCGAGCAGGAGTTCCTCACTGATGCT 895768 Query 47394 CTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTC 47453 || ||| | | || |||||||| || | ||| | ||||||| || || ||| Sbjct 895769 CTTCCCTGTGGCCTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTCGTC 895828 Query 47454 GCCGACCGCCTGCTCGTTCAGCT---AAAGTATCCCAAGATTTACCACACC---GAGAAT 47507 || ||||| || || ||| || ||| ||||| ||| ||| | | ||| Sbjct 895829 GCTGACCGTCTCCTGGTTGCCCTTGGAAA------CAAGAAGTACTACAACTCTGCCAAT 895882 Query 47508 CCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGC 47567 || ||||| || ||| | ||| || || | |||||||||||||| || |||||||| Sbjct 895883 CCCTTCGACTTCATGGAGTCCATCTCTCTGGCTGGCAAGACCAACTTCTTTGAGAAGCGT 895942 Query 47568 GTCGGCGAATA 47578 ||||| || || Sbjct 895943 GTCGGTGACTA 895953 >seq29 Length=375576 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| |||||| Sbjct 277459 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCA 277400 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | |||||||| ||||| || || |||||||||||| ||| || ||| Sbjct 277399 GCGAAAATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTA 277340 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | |||||| | | ||| || |||| ||| | || || ||||| || || Sbjct 277339 ACGTTG-TCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGT 277281 Query 127096 TTTTAC 127101 || || Sbjct 277280 CTTGAC 277275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475496639368000