Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03-
24] 700 sequences; 31,454,985 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq29 100 2e-15
seq45 86.0 4e-11
>seq29
Length=375576
Score = 100 bits (110), Expect = 2e-15
Identities = 116/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || |||||||| || || || || |||||||| || || || || || ||||||||
Sbjct 277646 ATCCTCCAGTTGCTTGCCCGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTT 277587
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||||||||||||| ||||| || || || || | | | | ||| |||||||
Sbjct 277586 GTCTTGAATCTTTGACTTGACGTTATCGATGGTGTCCGACGACTCTA-CTTCGAGGGTAA 277528
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || |||||||||||||| ||||| |||||
Sbjct 277527 TGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTG 277494
Score = 91.5 bits (100), Expect = 1e-12
Identities = 105/139 (76%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||| || ||||| ||||| ||||| || || || || || ||||| ||| || |
Sbjct 277202 ACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC-GCTCAGGG 277144
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | | ||| ||||| ||||||||||| || || || || || || ||||||||||| |
Sbjct 277143 TGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGAATGC 277084
Query 480670 CTTCCTTGTCTTGAATCTT 480688
|||||||||| ||||||||
Sbjct 277083 CTTCCTTGTCCTGAATCTT 277065
>seq45
Length=160172
Score = 86.0 bits (94), Expect = 4e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || || ||||| || || || || || || ||||| ||||| || || || || ||
Sbjct 111665 GCTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCC 111724
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| ||||| ||||| || || | ||||| ||||| || || || || || || ||
Sbjct 111725 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACTGCTGCTGCCATT 111784
Query 474857 GCTTATGGTCTTGATAAGAA 474876
||||| ||||||||||||||
Sbjct 111785 GCTTACGGTCTTGATAAGAA 111804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268149173603600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |