Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 3e-15 seq18 86.0 5e-12 >seq20 Length=469091 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 29648 AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCC 29707 |||| || ||||||||||||||||| |||||||| |||| ||||||| | || Sbjct 364482 AGCGCATCGACGTGGTCAAGGTAGACATGAGCATCACCCATAGTGTGGATGAGGGTGCCG 364541 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 || | || ||| |||| || | || | ||||| |||| |||| ||||||||| Sbjct 364542 GGGTGGAGATCGGCAGCGTGGGCAAGAATATGAGTGAGAAGAGCGTAGGAGGCGATGTTG 364601 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAG 29820 ||||| || || || ||||| || | || |||||||||||| || ||||| Sbjct 364602 AAGGGTACACCAAGACCCATATCACAGGATCTCTGGTAGAGCACACAAGAGAG 364654 >seq18 Length=518351 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/187 (73%), Gaps = 10/187 (5%) Strand=Plus/Plus Query 53489 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCA 53548 ||| |||||||||| | || | ||| ||| | ||| |||| || |||||||| || Sbjct 217057 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATCCCCCAGATTGGTGACAAGTTCGCC 217116 Query 53549 TC-CTTCACGGCGCAAAAGGGGAC-ATGCGGAGCGGTCCTGACT--CAGGAGGACATGCC 53604 || | |||||| || ||||| || || | | | || || |||||||||||||| Sbjct 217117 TCTCGTCACGGT-CAGAAGGGAACTATTGGTATCA---CTTACCGCCAGGAGGACATGCC 217172 Query 53605 CTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCA 53663 |||| || | || || ||||| ||||| || || ||||||||||||||| |||| || Sbjct 217173 CTTC-ACTCGTGAAGGTGTGGTTCCCGATCTGATTATCAACCCCCACGCCATTCCTTCTC 217231 Query 53664 GGATGAC 53670 | ||||| Sbjct 217232 GAATGAC 217238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406159734920200