Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 3e-15 seq20 93.3 3e-14 >seq18 Length=518351 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/187 (74%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 48505 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCG 48564 ||| |||||||||| | || | ||| ||| | ||| |||| ||||||||||| || Sbjct 217057 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATCCCCCAGATTGGTGACAAGTTCGCC 217116 Query 48565 TC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCC 48621 || | |||||| || ||||| || ||| | || ||| ||||||||||||||| Sbjct 217117 TCTCGTCACGGT-CAGAAGGGAACTATTGGTATCA--CTTACCGCCAGGAGGACATGCCC 217173 Query 48622 TTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAG 48680 ||| || | || || ||||| ||||| || || ||||||||||||||| |||| || | Sbjct 217174 TTC-ACTCGTGAAGGTGTGGTTCCCGATCTGATTATCAACCCCCACGCCATTCCTTCTCG 217232 Query 48681 GATGACC 48687 |||||| Sbjct 217233 AATGACC 217239 >seq20 Length=469091 Score = 93.3 bits (102), Expect = 3e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198 || |||| || ||||| || |||||||| ||||| || |||| ||||||| | Sbjct 364479 TTAAGCGCATCGACGTGGTCAAGGTAGACATGAGCATCACCCATAGTGTGGATGAGGGTG 364538 Query 27199 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 27258 || || | || ||| |||| || | || | ||||| |||| |||| ||||||| Sbjct 364539 CCGGGGTGGAGATCGGCAGCGTGGGCAAGAATATGAGTGAGAAGAGCGTAGGAGGCGATG 364598 Query 27259 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 27314 || |||||||| || || ||||| || | || |||||||||||| ||| ||||| Sbjct 364599 TTGAAGGGTACACCAAGACCCATATCACAGGATCTCTGGTAGAGCACACAAGAGAG 364654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504047641700