Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20antarcticum_20[genbank_20GCA_5F002072345.1_202017-03- 24] 700 sequences; 31,454,985 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq29 154 4e-32 seq13 114 3e-20 seq10 111 4e-19 seq9 87.8 4e-12 >seq29 Length=375576 Score = 154 bits (170), Expect = 4e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| || || |||||||| || || || ||| Sbjct 277494 CAAATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTCGAAGTAGAGTCGTCGGAC 277553 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||| ||||| ||||| ||||| || ||||||||| Sbjct 277554 ACCATCGATAACGTCAAGTCAAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAGCAA 277613 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || |||||||| || || || || || ||||| | || |||| |||| || ||| | Sbjct 277614 CGTCTCATCTTCGCGGGCAAGCAACTGGAGGATGGTCGTAC-CTTGTCCGACTACAACAT 277672 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 277673 CCAGAAGGAGTCCACTCTACACCTGGT 277699 Score = 143 bits (158), Expect = 6e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 277003 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAACGTCAAGT 277062 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| ||||| || ||||| |||||||| || || |||||||| |||| Sbjct 277063 CCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTCATCTTCGCTGGAA 277122 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || || |||||| ||| | || || || || || || | Sbjct 277123 AGCAGCTTGAGGATGGCCGCACCCTGAGCGATTACAACATTCAGAAGGAGTCCACCCTTC 277182 Query 178123 ATCTTGT 178129 | ||||| Sbjct 277183 ACCTTGT 277189 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || || ||||| || || |||||| || ||| Sbjct 277722 CAAATCTTCGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCCGAC 277781 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 277782 ACCATCGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCCCCTGACCAGCAG 277841 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| || ||||| | || || | || || ||| || Sbjct 277842 CGTCTTATCTTCGCCGGTAAGCAGCTAGAGGATGGCCGCACCCTCTCTGACTACAACATC 277901 Query 178104 CAAAAAGA 178111 || || || Sbjct 277902 CAGAAGGA 277909 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| ||||| || |||||||||||||| || || |||||||| | Sbjct 277273 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTTGAGTCTTCTGACACCATTG 277332 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || ||||| |||||||| || || ||||| || |||||||| || || | Sbjct 277333 ACAACGTTAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGTCTCA 277392 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | ||||| ||||| ||||| || ||||| | || || |||| || ||| |||| || | Sbjct 277393 TTTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGG 277452 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || || || Sbjct 277453 AGTCCACTCTCCACCTCGT 277471 >seq13 Length=663050 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 197747 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 197691 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 197690 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCG 197631 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || |||||||| ||||| | || || ||| || ||| |||| Sbjct 197630 CCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 197571 Query 178106 AAA 178108 || Sbjct 197570 GAA 197568 >seq10 Length=804368 Score = 111 bits (122), Expect = 4e-19 Identities = 189/271 (70%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 214123 CCAAAGTTTTTCTGGTTG--CTT-TTGCGGCAAATGGCATCTTTGTATGCGATGAAAGGC 214179 || ||||| ||||||||| ||| ||| |||| ||||| ||||| ||||| || Sbjct 330671 CCCAAGTTCTTCTGGTTGGACTTCTTGTTGCAA---GCATCCTTGTACAGCATGAAGGGG 330727 Query 214180 ATTCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACC 214239 | || ||| ||||| |||||||| || |||||| | || ||||| | | Sbjct 330728 TTACCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTGATAGTC 330787 Query 214240 TTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAG 214299 || | | | ||||| || |||||||| || || |||| ||| || || ||||||| Sbjct 330788 TTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAG 330847 Query 214300 ACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTG 214359 |||||| | ||||| | ||||||||||| ||||| || |||| | || ||| | Sbjct 330848 ACATCAGCGAGACCTGAGGCCTCGTTGGGACAGAAGAGGGTCCAGTCACCGTTAGCTTCA 330907 Query 214360 ACTCTTTTCATGAAAAGGTCGGAAGTCCAGA 214390 || | |||||||| || |||| |||||||| Sbjct 330908 ACACGCTTCATGAACAGATCGGGAGTCCAGA 330938 >seq9 Length=869820 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || |||||||| || || ||||||||||| || |||||||| Sbjct 635342 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAG 635401 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | || || ||| |||| || || || || || || || || Sbjct 635402 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 635457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203720404035800